Microbacterium wangchenii: E4K62_13440
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Entry
E4K62_13440 CDS
T06490
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mwa
Microbacterium wangchenii
Brite
KEGG Orthology (KO) [BR:
mwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mwa03032
]
E4K62_13440 (topA)
03400 DNA repair and recombination proteins [BR:
mwa03400
]
E4K62_13440 (topA)
Enzymes [BR:
mwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E4K62_13440 (topA)
DNA replication proteins [BR:
mwa03032
]
Prokaryotic type
DNA Topoisomerases
E4K62_13440 (topA)
DNA repair and recombination proteins [BR:
mwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E4K62_13440 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QBR89591
LinkDB
All DBs
Position
complement(2772171..2774879)
Genome browser
AA seq
902 aa
AA seq
DB search
MAHGKKLVIVESPTKMRSIQGYLGDDYEVLSSVGHIRDLASKKDIPADKKEAYGKYSIDI
DNDFDPYYVVNDRKSKTVAELKRALKNADEVLLATDGDREGEAIAWHLLEVLKPKVPVKR
MVFHEITKDAIRDAVQHTRELDTSLVDAQETRRVLDRLYGWDVSPVLWRKVGSGREGTAL
SAGRVQSAATRLVVDRERERMAFVSASYWDVEASAVRDASAFTTRLARVDGAPLARGTDF
DDRGALKKAVVALDETQARELAAAIEAAGEATVTAVEAKPGTRSPKPAFTTSTLQQEAGR
KLSMSAKHAMSVAQRLYEKGYITYMRTDSTALSAQAVKAARQQAVSLYGDRAVPPNPRTY
RNNSKNAQEAHEAIRPSGEVFRTPASVSGELDRDEQRMYDLVWKRTVASQMSDAKYETTT
VTLRVEAGDRVAEFTASGTVYTFKGFLEAYEEGRDEKRGDADKAEDQSLPALAVGDTLRM
RDVEPKGHATSPKPRYTEASLVKALEEKGIGRPSTFASIIDVILDRGYVTKRGQALVPSW
LAFSVVRLLEEHFADLVDYDFTAALEDDLDAIARGEQKRTEWLRSFYFGSDEQVGLRNVV
DNLGEIDARELNSTRITDTATLRFGKYGPYLEVTDPAEPDSRRIVNIPDDLAPDELTPDK
VQELIDAPVAGDRVLGENPENGKLIVVKDGRYGPYVQEVDPEEPENVDEATGEVVEAPKK
KTAKKDAAPKPRTASLFRSMSPETIDLDMALQLLTLPRVVGADPESGEEITAQNGRFGPY
LKKGTDSRSLDSEQQIFDITLEEALAKYAEPKYGARRASSALKEFDNDPTSGKPIRLRDG
RFGPYVTDGTTNATIPRGENAMDVTFERAVELLADKRAKGPAPKRTAAKRAPAKKKAPAK
KS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtggcacacggaaaaaagctcgtcatcgtcgagtcgccgacgaagatgaggtcgatccag
ggatacctcggagacgactatgaggtgctcagctcggtcggccacatccgcgatcttgcg
agcaagaaggacatccctgcggacaagaaagaggcgtacgggaagtactcgatcgacatc
gacaacgacttcgatccgtactacgtcgtcaacgaccgcaagagcaagacggtcgccgaa
ctcaagcgcgccctgaagaacgccgacgaggtcctgctcgccaccgatggtgaccgcgag
ggtgaggccatcgcgtggcacctgctcgaggtgctcaagcccaaggtccccgtcaagcgc
atggtcttccacgagatcacgaaggacgccatccgcgacgccgtccagcacacgcgtgag
ctggacacctccctcgtcgacgcgcaggagacccgtcgcgtcctcgatcgcctgtacggc
tgggacgtctctcctgtgctgtggcgcaaggtcggctcgggccgcgagggcacggcactc
agcgccggccgtgtgcagtccgccgccacccgcctcgtcgtcgaccgtgagcgcgagcgc
atggccttcgtctcggcgtcgtactgggatgtcgaggcgtccgccgtccgcgacgcctcc
gcgttcacgacgcggctggcccgcgtcgacggtgcgcccctcgcgcgcggcaccgatttc
gatgaccgcggcgcgctgaagaaggccgtcgtcgccctcgacgagacgcaggcgcgcgaa
ctcgccgccgcgatcgaggcggcgggcgaggcaaccgtcaccgccgtcgaggccaagccc
ggtacgcgcagccccaagcccgcattcaccacctccacgctgcagcaggaggccggacgc
aagctgtcgatgagcgcgaagcacgccatgagcgtcgcccagcggctctacgaaaagggc
tacatcacctatatgcgcaccgactcgaccgcgctgtcggcgcaggccgtgaaggccgcg
cgccagcaggcggtctccctgtacggcgaccgtgccgtgccgccgaacccgcgcacctac
cgcaacaactccaagaacgcccaggaggcccacgaggccatccggccctcgggtgaggtc
ttccgtacgcccgcgtccgtttccggcgagctcgatcgcgacgagcagcggatgtacgac
ctggtgtggaagcgcaccgtggccagccagatgtccgacgcgaagtacgagacgacgacc
gtcacgctgcgcgtggaggccggcgaccgcgtcgccgagttcaccgcatccggcaccgtg
tacaccttcaagggcttcctcgaggcctacgaggagggacgcgacgagaagcgcggcgac
gccgacaaggccgaggaccagtccctgcccgctctcgccgtcggcgacacgctgcgcatg
cgcgacgtcgagccgaagggccacgccacgtcgcccaagccccgctacaccgaggcgagc
ctcgtcaaggcgctggaggagaagggcatcggacgcccctccacgttcgcgagcatcatc
gacgtgatcctcgaccgcgggtacgtcaccaagcgcggccaggccctcgtgccgagctgg
ctcgcgttcagcgtcgtgcgcctgctcgaggagcacttcgccgacctcgtcgactacgac
ttcaccgccgcgctcgaggacgacctcgacgcgatcgcccgcggcgagcagaagcgcacc
gaatggctgcgctccttctacttcggttcggatgagcaggtgggtcttcgcaacgtcgtg
gacaacctcggcgagatcgacgcgcgcgagctcaactccacgcgcatcaccgacaccgcc
acgttgcgcttcggcaagtacggcccctatctcgaggtgaccgaccccgccgagccggac
tcgcgccgcatcgtcaacatccccgacgacctcgcccccgacgagctcacgcccgacaag
gtgcaggagctcatcgacgcgcccgtcgccggcgaccgcgtgctgggggagaacccggag
aacggcaagctcatcgtggtcaaggacggccggtatggtccgtacgtccaggaggtcgac
ccggaggagccggagaacgtcgacgaagccaccggcgaggtcgtcgaggcgccgaagaag
aagacggcgaagaaggatgcggcgcccaaaccccgcactgcctcgctgttccgctccatg
tcgccggagacgatcgacctcgacatggcgctgcagctgctgacgctgccgcgcgtcgtc
ggtgccgatcccgagtcgggtgaggagatcacggcgcagaacggccgcttcggcccgtac
ctgaagaagggcaccgactcgcggtcgctggattcggagcagcagatcttcgacatcacg
ctcgaggaggcgctggccaagtacgccgagccgaagtacggcgcgcggcgtgcgtcgagt
gcgctgaaggagttcgacaacgatcccaccagcggcaagccgatccgcctgcgcgacggc
cgcttcggcccgtacgtgaccgacgggacgacgaacgcgaccatcccgcgcggcgagaac
gcgatggatgtcacgttcgaacgtgccgtggagcttctggccgacaagcgtgcgaagggt
cccgcgcccaagcgcacggcggccaagcgcgcgccggcgaagaagaaggcgccggcgaag
aagtcgtga
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