Mycoplasma wenyonii: WEN_03205
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Entry
WEN_03205 CDS
T02179
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mwe
Mycoplasma wenyonii
Pathway
mwe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mwe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WEN_03205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mwe03019
]
WEN_03205
03016 Transfer RNA biogenesis [BR:
mwe03016
]
WEN_03205
Enzymes [BR:
mwe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WEN_03205
Messenger RNA biogenesis [BR:
mwe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WEN_03205
Transfer RNA biogenesis [BR:
mwe03016
]
Prokaryotic type
tRNA degradation factors
WEN_03205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
Motif
Other DBs
NCBI-ProteinID:
AFN65420
UniProt:
I6ZJN8
LinkDB
All DBs
Position
complement(602454..604328)
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AA seq
624 aa
AA seq
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MSRNLFYKRVKVNRFSGSGYIPRFKLRITKENLKGALNNDLVLFRVPDARDSEPKVVKIV
ERFKLNFVVEVLKLLKQGIVVFFDDPQLPGKRDIYGTFSRVQVGHKLLVQLRSFPPERIQ
GRLLEILGHKDNPNVEFNSLVLDLKLPNDFESRSIQQEIEQLKEKRESFLTNKESYKSLE
DKYFFTIDGEKAKDFDDAICTEKTSDGFKLYIAIADVWGYLRHLPSIAEEANQRGTSIYL
LNRVITMLPPILSEDLCSLREGERKNTICLSIEISGRAELKKSTLKIFPAFIRSKKRFTY
EQLNRYMQGKERDFFEDEQLKLAVLNSYEVAKRFVEREQFGNQETLRISQDKLEYQTNQE
EKIISLSRANEESSELISFEKVIEKYMVLANNLVGEWFKKHNIKTIYRVHKTPEQARVNN
FLYEMQHFRCNAPIFLDVPDLTTTKLNRLLTIFKQHPSFHLIQHNFLLTLPKAEYSLFNI
GHFGLNSQNYLHFTSPIRRLPDLLVHKALWMHFLAPKIYSNQERESSQESLEKLVYLSNL
AEQRAITAERRFIARKLYQYLLTKYPNQEFEGVIMSKSECGYNIRIDNCYEGYIRRENCK
SSKKLGDTIQLRKVEYSWDEFIER
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaggaatctcttttacaaaagggtaaaagttaatagatttagtggatcggggtat
ataccccgattcaaactaagaattactaaagagaatctcaaaggagctcttaataacgac
ttagttctttttagagttcctgatgcaagagatagtgaaccgaaggtagtaaagatagtt
gagagattcaagcttaactttgttgttgaggttttaaaactcttaaaacaaggaatagtt
gttttctttgatgatcctcaattacctggcaagagagatatatatgggacattttctaga
gtacaagtaggtcataaactacttgttcaactaagaagctttcctccagaaagaatacaa
ggaagactcttagagatactaggacacaaagataatccaaatgttgagttcaactcttta
gtactagatctaaaactccctaatgactttgaaagtagaagtattcaacaagaaatagaa
caacttaaagagaaaagagaatcttttctaactaataaagagagctataaatccctagaa
gataaatacttcttcactatagatggagagaaagctaaagacttcgatgatgccatttgc
acagaaaagacttcagatggctttaagttgtatattgcaattgcagatgtttgaggatat
ttgagacacttaccttctatagcagaagaggctaatcaaagaggtacttctatctatcta
ctaaatagagtgattactatgcttcctcctatactctctgaggatctttgctctctaaga
gaaggagagagaaagaatactatttgcctttctatagaaataagtggtagagcagagtta
aagaaatcaactctgaagatattcccagcttttattcgctctaaaaagagattcacatat
gaacaactgaatagatatatgcaagggaaagaaagagatttctttgaagatgaacagctt
aaattagccgttctaaatagctatgaggttgcaaagagatttgttgagagagaacaattt
gggaatcaagagactctgagaatctctcaagataagttagagtaccaaacaaatcaagag
gagaaaattatttctctctctagagctaatgaagaaagcagtgagctaattagttttgag
aaagtaatagagaaatatatggtgctagctaataacttagttggagagtgatttaagaaa
cataatataaagactatctatagagttcacaaaactccagaacaagctagagtcaataac
tttttatatgagatgcaacactttagatgtaatgcacctatattcttagatgttcctgac
ttaactaccactaagctaaatagattgttaactatctttaaacaacaccccagctttcat
ctaatacaacataacttcttattaactctcccaaaagcagaatacagtctctttaatata
ggtcactttggactaaatagtcaaaactatctacatttcacttctcccataagaagactc
cctgatctattagttcacaaagcattgtgaatgcacttcttagctcccaagatttactcc
aatcaagaaagagagagtagtcaagagagtttagagaaattagtctatctttctaatcta
gctgaacaaagagctattacagctgaaagaagatttatagctagaaagctgtatcaatat
ctcttaactaaatatcccaatcaagagtttgaaggggttattatgtctaaatctgaatgt
ggatacaatatccgaatagacaactgttacgagggatatattagaagagaaaactgcaaa
tcttctaagaaattaggagatactattcaactaagaaaagtagagtattcttgagatgaa
tttatagagagatag
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