Moellerella wisconsensis: MNY66_01265
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Entry
MNY66_01265 CDS
T07971
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mwi
Moellerella wisconsensis
Pathway
mwi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mwi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MNY66_01265 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mwi03021
]
MNY66_01265 (rpoC)
03400 DNA repair and recombination proteins [BR:
mwi03400
]
MNY66_01265 (rpoC)
Enzymes [BR:
mwi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MNY66_01265 (rpoC)
Transcription machinery [BR:
mwi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MNY66_01265 (rpoC)
DNA repair and recombination proteins [BR:
mwi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MNY66_01265 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EAD9
Motif
Other DBs
NCBI-ProteinID:
UNH42672
LinkDB
All DBs
Position
298080..302300
Genome browser
AA seq
1406 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTSLERRQILTEEQYLDALEEFGDEFDAKM
GAEAIQGLLKNLDLENECETLREELNETNSETKRKKLTKRIKLLEAFIQSGNKPEWMILN
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLAGPKEAERVYRSG
HASLHARVKVRITEEVKDGEGNVTINTGLVDTTVGRAILWMIVPRGLPYSLVNQPLGKKA
ISKMLNTCYRMLGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKAGIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTETVINRDGEEEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEVDCGTHEGILMTPVIEGGDVKEPLRERVL
GRVTAEDVLAPGTADILVPRNTLLNEKWCDLLEEHSVDSLKVRSVVGCETDFGVCAKCYG
RDLARGHIINSGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVRNTGTLKL
FNAKFVKNTEGKLVITSRNTELRLIDEFGRTKESYKVPYGAHLSKGDGSAVTGGETVANW
DPHTMPVVSEVSGIIRYSDMIDGQTITRQTDELTGLSSLVVLDTAERTGGSKDLRPALRV
VDANGKDVLIPNTDMPAQYFLPGKAIVQLDDGIAISAGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPMDGSEAYEEMIPKWRQLNVFE
GEMVERGDVISDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKVTIEDAGSSDFLEGEQVEYSRVKVANRKLEQEGKVPAKYARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQDRIRRRHMNDIVE
SPQVSADEATANLAELLNAGFSSKKD
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaagaccgaagagtttgatgcgatc
aaaattgctctggcatcaccagatatgatccgttcgtggtcatttggtgaagtgaaaaag
ccagaaaccattaactaccgtacgttcaaacctgagcgtgacggccttttctgcgcccgt
attttcggcccagtaaaagattacgaatgtttgtgcggtaagtacaaacgtttaaaacat
cgtggtgttatctgcgaaaaatgtggcgttgaagttacgcagactaaagtccgtcgtgaa
cgcatgggccacattgaattagcgtcaccaacagcacatatttggttcctgaagtcactg
ccttcccgtatcggcttactgcttgatatgccgctgcgtgatattgaacgtgttctgtat
tttgaatcttatgtcgttgttgaaggcggtatgactagcctagaacgtcgtcagatcctg
acagaagaacaatatctggatgcactggaagagttcggtgatgagtttgatgcaaaaatg
ggtgcggaagcaatccaaggcctgctgaaaaacctggatctggaaaatgaatgtgaaacg
ttgcgtgaagagttgaatgaaaccaactcagaaactaaacgtaaaaaactgactaaacga
atcaaactgttagaagcgtttattcaatctggaaataaaccagaatggatgattttaaac
gttctgccagttctgccaccggatttacgtcctttagttccattggatggcggtcgtttt
gcaacatctgatctgaatgacttatatcgtcgtgttattaaccgtaataaccgtctgaaa
cgtcttctggatctggctgcgcctgatatcatcgtacgtaacgaaaaacgtatgttgcag
gaagcggttgatgccttgttagataatggccgtcgtggccgtgctattacgggttctaac
aaacgtcctctgaaatctttggctgatatgatcaaaggtaaacaaggtcgtttccgtcag
aacttgctgggtaaacgtgttgactactctggacgttcggttatcaccgtgggtccatac
ctgcgcctgcatcagtgcggtctgcctaaaaaaatggcacttgaattattcaaaccattt
atctacggcaaattagaactgcgcggtttagcgacaaccattaaagctgcgaagaaaatg
gttgagcgtgaagaagccgtcgtttgggatatcctagacgaagtcatccgtgagcatcca
gtgatgctgaaccgtgcaccaacactgcaccgtttgggtatccaggcatttgaacctatt
cttatcgaaggtaaagcaatccaattacacccattggtttgtgcggcatacaacgccgac
ttcgatggtgaccaaatggcggttcacgttcctttgactttggaagcacagttagaagca
cgtgcgctgatgatgtcaacgaacaacattctttcgcctgcaagtggtgagccaattatc
gtaccatctcaggacgttgtcttgggcctgtactatatgactcgcgactgtgtaaatgcg
aaaggcgaaggcatggttttagcgggtcctaaagaagctgaacgtgtttatcgctctggt
catgcctctttgcatgcccgggttaaagttcgtatcacagaagaagttaaagatggtgaa
ggcaacgtcaccattaataccggtttagttgacacgactgttggtcgtgccattttgtgg
atgatcgttccacgcggattgccttactcattggttaaccagccattaggtaagaaagca
atctctaaaatgctaaatacttgctaccgtatgttaggtttaaaacctacggttatcttt
gctgaccaaattatgtataccggtttcgcttatgcagctcgttcaggtgcatcagtaggt
atcgatgatatggttattccagagaaaaaagccggtattatcgctgaagctgaagcagaa
gttgctgaaattcaggagcagttccaatcaggtctggtaactgcgggcgagcgttataac
aaggttatcgatatctgggctgcggcaaacgaacgtgttgctaaagcgatgatggaaaac
ctgtcgactgaaactgtgatcaaccgtgacggcgaagaagagcaacaagtctccttcaac
agcatctttatgatggctgactccggtgctcgtggttctgccgctcagatccgtcagctt
gcaggtatgcgtggtctgatggctaagccagatggttcaatcatcgaaacaccaatcacg
gcaaacttccgtgaaggtctgaacgttcttcagtactttatctcaacgcatggtgctcgt
aagggtcttgcggatacagcattgaaaacagctaactccggttatctgactcgtcgttta
gtcgacgttgcacaggacttggtcgttacagaagtcgactgtggtacacatgaaggtatc
ttgatgactccggttatcgagggtggcgatgttaaagaaccactgcgtgaacgtgtactg
ggtcgtgtaacagcagaagatgtattagctccaggaacagcggacattttagtcccacgt
aatacactattgaacgaaaaatggtgtgacctgttagaagagcattctgttgacagctta
aaagtacgttcagtggttggttgtgaaactgacttcggtgtctgtgctaagtgttacggt
cgtgatttggcgcgtggtcatatcatcaatagcggtgaagctatcggtgttattgcagca
cagtcaatcggtgagccgggtacacagcttacgatgcgtacgttccacattggtggtgcg
gcatctcgtgcggctgctgaatctagcatccaagttcgtaataccggtacacttaaactg
ttcaatgctaaattcgttaagaacacagaaggcaagttagttattacttctcgtaatact
gaattgcgtctgattgatgaattcggtcgtactaaagagagctataaagttccttacggt
gcgcacctgagcaaaggtgacggttcagcagttactggtggcgagaccgtagctaactgg
gatccgcatacaatgccggttgtcagtgaagtttcaggtattattcgttactctgatatg
attgatggtcagacgattactcgtcagactgatgagctgacaggtctgtcatctctggtc
gtattagatactgcggaacgtactggtggtagcaaagatttacgtccagcactgcgcgta
gtcgatgcgaatggtaaagatgtgttgatccctaacactgatatgccagcacaatacttc
ctgccgggtaaagctattgttcagttagacgatggtattgctatttctgccggtgatacg
ttagcgcgtattcctcaagaatctggcggtacaaaagatattaccggtggtctgccacgt
gttgctgacttgttcgaagcacgtcgtccgaaagagcctgcaattcttgctgaaatcagc
ggtattgtttcgttcggtaaagagaccaaaggtaaacgtcgtctggtgattacaccgatg
gacggctctgaagcttacgaagagatgatccctaaatggcgtcagcttaacgtattcgaa
ggcgaaatggttgaacgtggtgatgtgatctccgatggtccagaatctccacatgatatc
ctgcgtctgcgtggcgttcacgcggtaacgcgttacatcaccaacgaagttcaggaagtt
taccgcctgcaaggcgttaagataaacgataaacacattgaagttatcgtgcgtcagatg
ctgcgtaaagtcactattgaggatgcaggaagttctgacttcctcgaaggtgagcaggtt
gagtattcacgcgttaaagtcgcaaaccgtaaattggaacaagaaggcaaagtcccagcg
aaatatgctcgtgacttactgggtattacgaaggcatctctggcaacagaatcctttatc
tcagcggcatcgttccaagaaacaacacgcgtactaacagaagccgcagttgcgggtaaa
cgtgatgaactccgtggtctgaaagagaacgttatcgtgggtcgtctgatcccagcaggt
actggttttgcttatcatcaggatcgtattcgtcgccgtcatatgaatgacatcgtcgaa
tcaccacaagtaagtgctgatgaagcaacagctaacctggctgaactgttaaatgccggt
ttcagcagcaaaaaagattaa
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