Moellerella wisconsensis: MNY66_14535
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Entry
MNY66_14535 CDS
T07971
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mwi
Moellerella wisconsensis
Pathway
mwi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mwi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNY66_14535 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mwi03019
]
MNY66_14535 (rnr)
03016 Transfer RNA biogenesis [BR:
mwi03016
]
MNY66_14535 (rnr)
Enzymes [BR:
mwi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MNY66_14535 (rnr)
Messenger RNA biogenesis [BR:
mwi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MNY66_14535 (rnr)
Transfer RNA biogenesis [BR:
mwi03016
]
Prokaryotic type
tRNA degradation factors
MNY66_14535 (rnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
WHD_RNase_R
Hrs_helical
RNA_pol_Rbc25
Rho_RNA_bind
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UNH42231
LinkDB
All DBs
Position
complement(3326995..3329484)
Genome browser
AA seq
829 aa
AA seq
DB search
MSQDPYVKREAEKYDSPIPSREYILEILSQRPAPIKREEIAKILNLSSEEDLEALRRRLR
AMERDGQLIFTRRQCYALPERLDLLKGTVIGHRDGYGFLRIDGKKEDYYISADEMKRALH
GDVVLAQPHGQDRKGRTEVRIVRVLVPRNNQIVGRYFLESGMGFVVPDDSRLSFDILIPK
EHTNGARMGNVVVVELVSRPQRRLQAVGNITEVLGETMGTGMAVEIALRTHEIPHGWPAQ
VEKQVADLSEHVPEAAKQGRVNLSDLPLVTIDGEDARDFDDAVYCAPKKGGGWRLWVAIA
DVSYYVRPNTALDDEARSRGNSVYFPSQVVPMLPEVLSNGLCSLNPGVDRLCMVCEMTIS
ASGKLSSYKFYEAVMNSHARLTYTKVWKILQGDEELREHYQPLVPHLQHLHDLYKALESA
REERGAISFESEEAKFIFNAERRIERIEPVQRNDAHKLIEECMILANIAAARFVEKNEEP
ALYRVHDRPKEESVMNLRSVFSELGLTLPGGMTPDPKDYAQVMHDVAERPDHELLQTMLL
RSMKQAIYDPENRGHFGLALKSYAHFTSPIRRYPDLTLHRGIKYLLAKEQGQAEKHWTPT
GGWHSDMDHMLQLGEHCSMTERRADEATRDVADWLKCDFMQDQVGQVFTGLITSVTGFGF
FVRLNELFIDGLVHVSTLDNDYYRYDAVGQRLIGESSNTVYRLGDEVEIRVEAVHMDERK
IDFALISTTRKAKNVGKTARDKAKKDARNSGQGKSRKDRDFSKDANFQPDTAFKKKAKKA
PKNQAKTDAAKPKAEKTGVKKAKKASDKTKKITAKLQAKRATKKVNKDA
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatccttatgtgaaaagagaagcagaaaaatacgattcaccgatcccaagt
agagaatatatcttagagatcctatcgcaacgcccagcaccgattaaacgtgaagagatt
gcgaaaatactgaacctaagttcagaagaagatttagaagcgttacgtcgccggttacgc
gcgatggagcgtgatggacaattaatttttactcgtcgccaatgctatgcattacctgaa
agattagatttattaaaaggaacggtcattgggcatcgcgatgggtatggttttttacgt
atcgatggcaaaaaagaagattattatatttctgctgacgaaatgaaacgtgctttacac
ggcgatgtcgtgttggctcaacctcatggacaagaccgtaaaggacgtactgaagtacgt
atcgtacgggttttagttcctcgcaataatcaaattgttgggcgctattttcttgagtca
ggcatgggctttgtggtgccagacgacagtcgcttgagcttcgatattttaattcctaaa
gagcacactaatggtgcacgtatggggaatgtggtggtggtcgagctggttagccgtcca
cagcgtcgcttacaggctgtcggtaatattactgaagtgctgggtgaaactatgggaact
ggcatggcggtagaaattgccttgcgtactcatgaaattcctcatggctggccggctcaa
gttgaaaaacaagtggctgatttaagcgaacatgttcccgaagcggctaagcaagggcga
gttaacttaagtgatttacctttagttaccatagatggcgaagacgcacgcgacttcgat
gatgccgtatattgtgcgccgaagaagggcggtggctggcgtttatgggtggcgattgct
gatgttagctattacgtacgtcctaatactgcgctggatgatgaggctcgaagccgaggt
aactccgtttattttccatcgcaagtggtgccaatgttgccagaggtgctatcaaatggc
ctatgttcattgaatcctggtgtagatcgtttgtgtatggtctgtgagatgacgatttca
gctagtggtaagttatcttcatacaaattctatgaagcggtgatgaactctcatgcgcgt
ttaacgtataccaaagtttggaaaatcttgcagggcgatgaagaactgcgcgaacattac
cagccgctcgttcctcatttacagcatctgcatgatttatataaagcactagaaagcgcg
cgtgaagaacgcggggcgatttcttttgaatcagaagaagctaaatttatctttaatgct
gaacgtcgaattgaacgtattgagccagtgcagcgcaacgatgcgcataaactgattgag
gaatgtatgatcctcgctaatattgctgcggctcgatttgttgagaaaaatgaagaaccg
gcattatatcgtgttcatgatcgtccaaaagaagagagcgtgatgaacttgcgttctgtc
tttagtgagcttggtttaaccttgccggggggtatgacgccagatccaaaagattacgcc
caggtgatgcatgatgttgctgagcgtcctgatcatgagctgctgcaaaccatgttattg
cgttcgatgaaacaggctatttacgatcctgagaatcgtggtcactttggtttagcacta
aaatcatacgcgcactttacttctccaattcgtcgttaccctgatttgaccttacacaga
ggcattaaatatttattagctaaagagcaaggacaagccgaaaaacattggactccgacg
ggcggctggcattctgatatggatcatatgctgcaattaggtgagcattgttcgatgaca
gagcgccgtgccgatgaagcgactcgcgatgtggctgattggctaaaatgtgactttatg
caagatcaagtgggccaagtctttaccggtttgattactagcgttactggttttggtttc
tttgtgcgcttgaatgaactgttcattgatggtttagttcatgtatccactttagataac
gattattaccgttatgatgctgttggtcagcgtctgattggtgaatcttcaaataccgtt
tatcgtctaggcgatgaagtcgaaattagagttgaagctgttcatatggacgagcgtaag
attgatttcgccttaatatcaacgacgcgtaaagctaaaaatgtgggtaaaacagctcgc
gataaagctaaaaaagacgccagaaacagcgggcaaggtaaatcacgtaaagatcgtgat
ttttctaaagatgctaatttccagccagatacagcatttaagaaaaaagctaaaaaagcc
cctaaaaatcaggctaaaaccgatgctgctaagcccaaagcagaaaaaactggcgtaaaa
aaagctaaaaaagcttcggataaaaccaagaaaataaccgctaaattgcaggctaaacgt
gcgactaaaaaagtcaataaagacgcttaa
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