Microbacterium wangruii: QNO26_04600
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Entry
QNO26_04600 CDS
T11147
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mwn Microbacterium wangruii
Pathway
mwn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mwn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QNO26_04600
09124 Replication and repair
03420 Nucleotide excision repair
QNO26_04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mwn03021
]
QNO26_04600
03400 DNA repair and recombination proteins [BR:
mwn03400
]
QNO26_04600
Enzymes [BR:
mwn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNO26_04600
Transcription machinery [BR:
mwn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QNO26_04600
DNA repair and recombination proteins [BR:
mwn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QNO26_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIM29183
LinkDB
All DBs
Position
complement(982251..983909)
Genome browser
AA seq
552 aa
AA seq
DB search
MADGPLIVQSDRTVLLEVAHPDAETARHELAIFAELERAPEHIHTYRITRLGLWNARAAG
HDADDMLATLDRWSRFPVPASVSMDLRETVNRYGRLIIERADVPGFGEGVLVLRSTDGAV
LSEVSRNKRISPLLIGHPTPDTFVVDAWARGQIKQELLKIGWPAEDHAGYTPGTPHPIEL
AEDGWTLRPYQRTAVDVFHEGGSGVVVLPCGAGKTLVGAGAMAQTKTTTLILVTNTVSAR
QWRDELLKRTSLTPEEIGEYSGQVKEIKPVTIATYQILTAKRGGQYAHLSLLDALDWGLI
VYDEVHLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQ
GFISPAVCYEVRVDLPVDERLEYAASADEDRYRLAATAPVKIEVVRDLVARHEGEQILVI
GQYLDQIDELAEALDAPKITGAVPVDEREQLYQAFRVGEVPVLVVSKVANFSIDLPEASV
AIQVSGSFGSRQEEAQRLGRLLRPKTNGHTASFYTLIARDTVDQDFAQNRQRFLAEQGYS
YTILDAEQVAAA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggccccctcatcgtgcagagcgaccggacggtgctgcttgaagtagcccat
ccggatgccgagaccgcgcgccacgagctcgcgatcttcgcggagctcgagcgcgccccc
gaacacatccacacctaccgcatcacccggctgggactgtggaatgcccgtgcggcgggc
cacgacgccgacgacatgctcgcgaccctcgaccgctggtcgcggttcccggtgccggca
tcggtgtcgatggacctgcgcgagaccgtcaatcgctacggccgcctgatcatcgagcgc
gccgacgtccccggcttcggcgagggcgtgctggtgctgcgctccaccgacggcgccgtg
ctgtctgaggtgtcgcgcaacaagcgcatcagcccgctgctgatcggccacccgaccccc
gacaccttcgtcgtcgacgcgtgggcgcgcgggcagatcaagcaggagctgctgaagatc
ggctggcccgccgaggaccacgccggctacaccccgggcaccccgcacccgatcgaactg
gctgaggacggctggacgctgcgcccctaccagcgcaccgccgtggacgtcttccacgag
ggcggctcgggcgtcgtggtgctcccctgcggcgcgggcaagaccctggtcggcgccggc
gcgatggcgcagacgaagaccacgacgctgatcctcgtgaccaacaccgtcagcgcccgg
cagtggcgcgacgagctgctcaagcgcacgagcctcacgcccgaggagatcggcgagtac
tccggccaggtcaaggagatcaagccggtcacgatcgcgacctaccagatcctcaccgcc
aagcgcggcggccagtacgcccacctgtcgctgctggacgccctcgactggggcctcatc
gtgtacgacgaggtgcacctgctgccggcgccggtgttcaagctcaccgccgacctgcag
gcccgccgccggctcggtctcaccgccacgctcgtgcgcgaggacggccgcgagggcgac
gtgttcagcctcatcggccccaagcgcttcgacgccccctggaaggagatcgaggcccag
ggcttcatctcccccgccgtctgctacgaagtgcgcgtggacctgcccgtcgacgagcga
ctggagtacgcggcatccgccgacgaggaccgctaccgtctcgccgccacggcgccggtg
aagatcgaggtcgtccgcgacctggtggcccgccacgagggcgagcagatcctggtgatc
ggccagtacctcgaccagatcgacgagctcgccgaggcgctcgacgcgccgaagatcacc
ggcgcggtgcccgtggacgagcgcgagcagctgtaccaggcgttccgggtcggcgaggtg
ccggtgctggtggtgtcgaaggtcgcgaacttctcgatcgacctgcccgaggcatccgtc
gccatccaggtgtcggggtcgttcggctcccgccaggaggaggcccagcgcctggggcgt
ctgctgcggcccaagaccaacgggcacacggcgagcttctacacgctcatcgcccgcgac
accgtcgaccaggacttcgcgcagaaccggcagcggttcctcgccgagcaggggtactcg
tacacgatcctcgacgccgagcaggtcgcggcggcctga
DBGET
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