Microbacterium wangruii: QNO26_10990
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Entry
QNO26_10990 CDS
T11147
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mwn Microbacterium wangruii
Pathway
mwn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mwn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNO26_10990 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mwn03021
]
QNO26_10990 (rho)
03019 Messenger RNA biogenesis [BR:
mwn03019
]
QNO26_10990 (rho)
Transcription machinery [BR:
mwn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QNO26_10990 (rho)
Messenger RNA biogenesis [BR:
mwn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNO26_10990 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
AAA_22
PIP5K
Motif
Other DBs
NCBI-ProteinID:
WIM29765
LinkDB
All DBs
Position
complement(2311482..2313548)
Genome browser
AA seq
688 aa
AA seq
DB search
MATDAEASEQTPAEAETADVVESVAAVENGATEAPAAAAEEKPAKAPRKRAPRRAKSSDL
VAQAEAAAAEAPAEAAPAAEAVAAAEDTPAAETTPADGADAPAADAAPPARAKAPRKTGA
RRSSSRSVAAEAEPAAAEPAANTDTTDAPAADRSEPASAAPDEKPAADTASAEKSAHAAP
AEKAPAEKAPAEKASADNAPADKAGESAGDGEQNEGEGTSRSRSRSRNRNRNRNKDGNGQ
NGSGQNGNAPEQSERAPQPAPSHAADDDESGQGGRGRQRNKRRPQGTTNDEFETEIGEDD
VLIPIAGILDVLDNYAFVRTTGYLPGTSDVYVSLGQVKKYHLRKGDAVVGAIKQPRENEQ
SGRQKYNALVKVDSINGLSVDDAATRVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAP
IGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVKGEV
IASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGRVLTG
GVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDDVIFEEFKGTGNSELRLSR
QLADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLRETQ
SNVEFLVQMQKSMPAPGGSSHANDNSIR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccgacgccgaggcgagcgagcagaccccggccgaggccgagacggctgacgtc
gtcgagtccgtcgccgccgtcgagaacggcgccaccgaagcgccggccgccgctgcggag
gagaagccggcgaaggcgccgcgcaagcgtgctccgcgtcgcgccaagagcagcgacctg
gttgcgcaggccgaagccgccgctgccgaggcaccggccgaggccgcccccgccgccgaa
gccgttgctgccgccgaggacacccccgctgccgagacgactcctgcggacggtgccgac
gcgccggccgcagacgcagccccgcccgcccgcgccaaggcgccgcgcaagaccggtgcg
cgccgcagcagcagccgctccgtcgccgcggaggcggagcccgccgccgcggagcccgcc
gcgaacaccgacacgacggacgccccggccgcggaccgctccgagccggcatccgccgcc
ccggacgagaagcccgcagcagacacggcatccgctgagaagtccgcccacgcggcaccg
gccgagaaggcaccggccgagaaggcacccgccgagaaggcatccgccgacaacgcaccc
gccgacaaggccggcgagtccgcgggcgacggcgagcagaacgagggcgagggcacgtcg
cgttcgcgcagccggtcgcgcaaccgcaaccgcaaccgcaacaaggacggcaacggccag
aacggcagcgggcagaacgggaacgccccggagcagtccgagcgcgcccctcagcctgcc
ccgtcccacgccgcggacgacgacgagtcgggtcagggcggccgcgggcgtcagcgcaac
aagcgccgtccgcagggcaccaccaacgacgagttcgagaccgagatcggcgaggacgat
gtcctcatccccatcgccggcatcctcgacgtgctcgacaactacgcgttcgtccgcacc
accggctacctccccggcacgagcgacgtctacgtgtccctcggccaggtcaagaagtac
cacctgcgcaagggcgacgccgtcgtgggcgccatcaagcagccccgcgagaacgagcag
tccggccgccagaagtacaacgccctggtcaaggtcgactcgatcaacggcctgtccgtc
gacgatgccgccacccgcgtggagttcggcaagctgacgccgctgtacccgcaggagcgc
ctgcgcctggagaccgcccccgagaagctgacccagcgcatcatcgacctggtcgccccc
atcggcaagggtcagcgcggcctcatcgtcgcgcccccgaaggcgggcaagacgatcgtc
ctgcagcagatcgcgaacgcgatcgccacgaacaaccccgaggtccacctcatggtcgtg
ctcgtggacgagcggcccgaagaggtcaccgacatgcagcgcaccgtcaagggcgaggtc
atcgcctcgacgttcgaccgtcccgccgaggaccacaccaccgtcgccgaactcgccatc
gagcgcgccaagcgcctcgtggagctcggccgcgacgtggtcgtgctgctggactcgatc
acgcgtctgggtcgcgcgtacaacatctcggccccgacgtcgggtcgcgtgctcaccggc
ggcgtggacgcctcggcgctgtacccgcccaagcgcttcttcggagcggcgcgcaacatc
gagaacggcggatcgctcacgatcctcgccacggctctggtggagaccggctccaagatg
gacgacgtgatcttcgaggagttcaagggcaccggcaacagcgaactgcggctgagccgt
cagctggccgacaagcgcatcttccccgccgtcgacgtcaacgcctcgagcacgcgtcgc
gaggagatgctgctgtcgcccgacgaggtgaagatcacgtggaagctgcgccgcgccctc
gccgggctcgacccgcagcaggcgctggaagtggttctgggcaagctccgcgagacgcag
tccaacgtcgagttcctggtgcagatgcagaagtcgatgcccgcgcccggcggcagcagc
cacgcgaacgacaacagcatccgctga
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