Methanothermobacter wolfeii: MWSIV6_0614
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Entry
MWSIV6_0614 CDS
T04587
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mwo
Methanothermobacter wolfeii
Pathway
mwo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mwo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MWSIV6_0614 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mwo03019
]
MWSIV6_0614 (cshA)
03009 Ribosome biogenesis [BR:
mwo03009
]
MWSIV6_0614 (cshA)
Enzymes [BR:
mwo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MWSIV6_0614 (cshA)
Messenger RNA biogenesis [BR:
mwo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MWSIV6_0614 (cshA)
Ribosome biogenesis [BR:
mwo03009
]
Prokaryotic type
rRNA helicases
MWSIV6_0614 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DUF5333
Cas3-like_C_2
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
SCM56622
UniProt:
A0A9E7UNL2
LinkDB
All DBs
Position
I:complement(539649..540926)
Genome browser
AA seq
425 aa
AA seq
DB search
MIGLEFSEFDISGEVNRALEDMGFERTTPIQSITLPVTLDGMDVVGEAQTGTGKTAAFSI
PILENLEPERVVQALVLCPTRELCLQVSEEIKRIGKYMNVRVLAVYGGQSIGNQISQLRR
GVHVVVATPGRLLDHIERGTVDLGSVSMLVLDEADEMLNMGFIDDIERILKNVPEKRQTM
LFSATVSKPILRIADRYMDKPQVMRVEKKHSPRIEEFYFKTREEDKIELLDWIISSNDIK
MGLIFCNTKKRVQRLRKQLERMGYSADEIHGDLSQSRRERVMDRFKKGRFNLLVATDVAA
RGIHVPDVEAVINYDLPFENEYYLHRIGRTGRAGSSGKSFTLVVGREVHRLRRIQSFTGN
RIKRKNMPTREEIRRDYERDLREILRKNLESKSYTDSELIGDLRGEGYSFRDISHALLDV
LESSK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgataggattagaattcagtgaatttgacatctcaggggaggttaacagggcccttgag
gatatgggatttgagaggacaactccgatccagtcaattacgttacctgttacacttgat
ggtatggacgtcgttggagaggcccagacagggaccgggaagaccgcggcattctccata
cctatacttgaaaatcttgaacctgaaagggttgtccaggcccttgtgctctgcccgacc
cgtgaactctgtctccaggtctcagaggagatcaaaaggatagggaaatacatgaatgtc
agggtgcttgctgtttacggtggtcagagcataggtaaccagatatcacagctcaggagg
ggtgtccatgtggttgttgcaacacccggaagactcctggatcacattgaaaggggcacc
gtggaccttggaagtgtctcaatgctggtgcttgacgaggcagatgagatgctcaacatg
ggcttcattgatgatattgaaaggatactaaagaatgtccctgaaaagcgccagacaatg
ctcttttctgcaaccgtgtcaaaaccaatactcaggatcgccgataggtacatggacaaa
ccacaggtcatgcgtgttgagaagaagcacagccctagaatagaggagttctacttcaaa
acgagggaagaggataaaatcgaactccttgactggataatctcatcaaatgacattaaa
atgggcctgatattctgtaacaccaagaagagggttcagagactgcggaagcagctggaa
cgtatgggttactctgcagatgagatccatggggatctttcacagtccaggcgtgagcgt
gtcatggaccggttcaagaagggacgtttcaacctccttgttgcaactgatgttgcagcc
aggggtatacatgtacccgatgttgaggccgtgataaactatgatctcccctttgagaac
gagtactacctccaccgtatcgggcgtaccggacgtgcaggttcaagcggaaaatcattc
acccttgttgttggaagggaggttcaccgactcaggagaatccagtccttcacaggaaac
aggataaagaggaagaacatgcctacgagggaggagatacggagggactatgagagggac
ctgagggagatcctcaggaagaaccttgaatcaaagagttacaccgactctgaactcata
ggcgacctcaggggtgagggctacagtttcagggatatctcccatgccctcctggatgta
cttgaatcctcaaagtga
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