Methanothermobacter wolfeii: MWSIV6_1707
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Entry
MWSIV6_1707 CDS
T04587
Symbol
csl4
Name
(GenBank) Exosome complex component Csl4
KO
K07573
exosome complex component CSL4
Organism
mwo
Methanothermobacter wolfeii
Pathway
mwo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mwo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MWSIV6_1707 (csl4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mwo03019
]
MWSIV6_1707 (csl4)
Messenger RNA biogenesis [BR:
mwo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MWSIV6_1707 (csl4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MWSIV6_1707 (csl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
A2L_zn_ribbon
ECR1_N_2
HypA
DmmA-like_C
OB_RRP5_4th
VWA_CoxE
Zn_Tnp_IS91
DUF7130
Zn_ribbon_RPAB4
Spt4
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
SCM58557
UniProt:
A0A9E7RUD1
LinkDB
All DBs
Position
I:complement(1559113..1559682)
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AA seq
189 aa
AA seq
DB search
MKVKSGDMVFPGDFLAVSEELLPSEGTYDDNGKIKSLVVGEVERDDKNKSIKVISRFSTP
PVLKTGTRVVGEVIDVRGQRALVRIHGIKGSRRALATYFVGGVHVSQAKKGYLSKLTEAF
RIGDIVEAKVTRVMGLDGIDLQTSGRELGVIKAMCTRCRHFMELNSRDEVKCPNCENREK
RKLSINYEG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaatctggggacatggtttttcccggagattttttagctgtaagtgaagaa
cttctaccatcagagggaacctatgatgataacgggaagataaaatcccttgttgttgga
gaggttgaaagagacgataagaacaagagtataaaggtgatatccaggttcagcaccccc
ccggtcctcaagacagggacaagggtcgtaggggaggtcattgatgtgaggggccagcgc
gcccttgtgaggatacatggcataaagggcagcaggagggcccttgcaacctactttgtg
ggcggtgttcatgtatcacaggcaaagaagggctacctttcaaagctaacagaggccttc
cgcataggggacattgtggaggcgaaggtcacaagggtcatgggcctcgatggcatagac
ctccagacatctggccgtgaattgggtgttataaaggccatgtgcacaaggtgcagacac
ttcatggagttaaacagcagggacgaggtaaagtgtcccaactgtgaaaatagagagaaa
agaaagctttcaataaactatgaaggttaa
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