Methanothermobacter wolfeii: MWSIV6_1765
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Entry
MWSIV6_1765 CDS
T04587
Symbol
rpa
Name
(GenBank) Replication factor A
KO
K07466
replication factor A1
Organism
mwo
Methanothermobacter wolfeii
Pathway
mwo03030
DNA replication
mwo03420
Nucleotide excision repair
mwo03430
Mismatch repair
mwo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mwo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MWSIV6_1765 (rpa)
03420 Nucleotide excision repair
MWSIV6_1765 (rpa)
03430 Mismatch repair
MWSIV6_1765 (rpa)
03440 Homologous recombination
MWSIV6_1765 (rpa)
03460 Fanconi anemia pathway
MWSIV6_1765 (rpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mwo03000
]
MWSIV6_1765 (rpa)
03032 DNA replication proteins [BR:
mwo03032
]
MWSIV6_1765 (rpa)
03400 DNA repair and recombination proteins [BR:
mwo03400
]
MWSIV6_1765 (rpa)
Transcription factors [BR:
mwo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MWSIV6_1765 (rpa)
DNA replication proteins [BR:
mwo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MWSIV6_1765 (rpa)
DNA repair and recombination proteins [BR:
mwo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MWSIV6_1765 (rpa)
MMR (mismatch excision repair)
MWSIV6_1765 (rpa)
DSBR (double strand breaks repair)
HR (homologous recombination)
MWSIV6_1765 (rpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Rep_fac-A_C
SHLD2_OB1
Zn_Ribbon_TF
DZR_2
DZR
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
SCM58654
LinkDB
All DBs
Position
I:complement(1615177..1617555)
Genome browser
AA seq
792 aa
AA seq
DB search
MKEEIKREYQKIKDRMSLEEFQERIEKRKQELDDVGFMDELSIATMITDEILRDENELIS
EKPEHRLDKISKLEEGASTPLTGRVMRISSPRTFTTRKGKDGKLTNVILADDTGEIRTVF
WTENIKFLKKFSEGDVIRIRDVNVKGGFGGRKEAHLMPRSTVEVLDPSDFPEFPEYTEEI
TPLGELVEDEEVNVIARIRGISRVRTFERDGRDGKFVTLELLDSTGSTTYTLWNNDVNLI
EELGLEEGDAVKILGAQTRRRDDSVTLTHTSTTRIIRGDYDVPEVREEIMKIGDLHEKDG
VTVIGLVTRVYEPIEFERNDGTTGSLRSVEVTDDTGSARVTLWNDDAFLKINKGDIVKIS
GARVEFDEYSNSYRINTNFNTRITINPKSDESLLRLLEEYREHLRPLKISQVLEIEDEGE
EVDVVGRIFSLTDPREFEREDGTGIVRSMELADETGKIRVSLWNEKAQKPLNIGDAIRIE
NARIRFGLYSVELSAGRTTRITEPLPEDIQDLPSFEELEEMLYTTKKIDELEEDNTDIRI
VARVIDLFDPKEFQRGDGTPGMVRTVEFADDTGSIRASLWDEKAEMPLSIGDPVKIENPR
VIYRDDMGGGRLELSIGRSSRIEAATERDMKLLPSFEELQEILYPLKNIEDLDDESRNVM
IRGELNEMYGGRILSVKCPSCNERLDMNEENICNFCGELVDEPRYLLMIPGWISDDTGEI
RTTFFGREAEKVLGMTTREVVDTINRSADESALQERVEDLNGATVTVIGNAEFDEYNEEL
RFIPRKVVNIEL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaaataaaaagggaataccagaagattaaggacagaatgtcccttgaagaa
tttcaggaacgcatagagaagaggaaacaggaacttgatgatgttgggttcatggatgaa
ctctcaatcgccacaatgataacagatgagatcctcagggatgaaaatgaactcatctca
gagaaacccgaacacaggctggataaaatatccaaactcgaggagggtgccagcacacca
ttgaccgggagggtcatgaggatatcaagtccaaggaccttcaccacaaggaagggaaag
gatggtaaactcacaaacgtaatccttgcagatgacacaggggaaatcaggacggttttc
tggacagagaacatcaagttcctgaagaaattcagtgagggcgacgtgataaggataagg
gatgtgaacgtaaagggcggcttcggaggcaggaaggaggcccatctgatgccaagatcc
acggttgaagtcctggacccctcagatttccctgaattccctgaatacaccgaggagatc
acacctttaggggaacttgttgaggacgaggaggttaatgtcattgcaaggatcagggga
atatcccgtgtaaggacctttgagagggatggaagggatggtaaatttgttacacttgaa
ctgcttgactccacaggttcaacaacctacaccctctggaacaatgatgttaacctcata
gaggaactgggacttgaagagggagacgccgtaaagatactgggggcccagacaaggaga
cgtgatgacagcgtgacactcacccacacaagcaccacaaggataatcaggggcgactac
gatgtccctgaagtcagggaggagataatgaagataggggacctccatgagaaggacggc
gtcaccgtgattggactggtaacaagggtctatgagccgatagaatttgagaggaacgat
ggcacaacaggctccctgaggtcagttgaggtcacagacgacacaggatctgcaagggta
accctctggaatgatgacgccttcctgaagataaacaagggggacatcgttaaaatatca
ggggcaagggtggagtttgatgaatacagcaactcctaccgcataaacaccaacttcaat
acaaggataaccatcaaccccaaatccgacgagtcactcctgaggctccttgaggagtac
agggagcacctgaggccattgaagatatcacaggtacttgaaattgaggatgaaggagag
gaggttgatgttgtaggccgcatattcagcctcacagatccaagggaatttgagagggaa
gacggcacaggaatcgtaaggtcaatggaacttgccgatgaaacaggcaaaataagggtc
agcctctggaacgagaaggctcaaaagcccctgaacatcggggacgccataagaattgag
aacgcaagaatcaggtttggtctatacagcgttgaactcagcgctggaagaacaacaagg
attactgagccactcccggaggacattcaggatttaccatcctttgaggagcttgaagaa
atgctctacacaacaaagaagatagatgaacttgaagaggacaacaccgacataaggata
gttgcaagggtcattgacctcttcgatccaaaggaattccagaggggtgatggaactcca
ggaatggtgaggacggttgaatttgcagatgacaccggctcaataagggcaagcctatgg
gatgagaaggctgagatgcccctcagcataggagaccctgtcaagatagagaatccgagg
gtaatctacagggatgatatgggtggaggcagacttgaactcagcataggaagaagttca
agaatcgaggcagccactgaaagggatatgaagctcctaccatcctttgaggagctccag
gagatactctaccctctgaaaaacattgaggaccttgatgatgagtcaaggaacgtcatg
atcaggggggagctcaatgaaatgtacgggggacgcatactctctgtgaaatgcccttcg
tgtaatgagaggcttgatatgaatgaggagaacatatgtaacttctgcggagaacttgtt
gatgaaccaaggtacctcctgatgatccccggatggatcagcgatgataccggagagata
aggacgaccttctttggaagggaggctgaaaaggtcctggggatgactacaagggaggtt
gttgatactataaacaggtccgcagatgaatcagcacttcaggagcgtgtcgaggatctt
aacggcgccaccgtaacggttatagggaacgcggagttcgatgaatacaatgaggagctt
agattcatcccgaggaaggttgtgaatattgaactctga
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