Candidatus Mycobacterium wuenschmannii: PT015_04465
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Entry
PT015_04465 CDS
T09639
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mwu
Candidatus Mycobacterium wuenschmannii
Pathway
mwu03030
DNA replication
mwu03430
Mismatch repair
mwu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mwu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PT015_04465 (dnaE)
03430 Mismatch repair
PT015_04465 (dnaE)
03440 Homologous recombination
PT015_04465 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mwu03032
]
PT015_04465 (dnaE)
03400 DNA repair and recombination proteins [BR:
mwu03400
]
PT015_04465 (dnaE)
Enzymes [BR:
mwu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PT015_04465 (dnaE)
DNA replication proteins [BR:
mwu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PT015_04465 (dnaE)
DNA repair and recombination proteins [BR:
mwu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PT015_04465 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WIM88751
LinkDB
All DBs
Position
905258..908800
Genome browser
AA seq
1180 aa
AA seq
DB search
MSKSFVHLHNHTEYSMLDGAAKVSPMLAEAQRLQMPAIGMTDHGNMFGASEFYNGATALG
ITPIIGIEAYIAPASRFETKRILWGDPGQKSDDVSGSGSYTHMTMMAENATGLRNLFKLS
SLASFEGQLGKWSRMDAELIAEHASGIIATTGCPSGEVQTRLRLGHHREALEAAAKWREI
FGPENFFLELMDHGLSIERRVRDGLLEIGRALNIPPLATNDCHYVTRDAAHNHEALLCVQ
TGKTLTDPTRFKFDGDGYYLKSAAEMREIWDNEVPGACDSTLLIAERVTSYAEVWAPKDR
MPVFPVPEGHDPASWLRHEVENGLKRRFPAATPDGYSERAAYEIEVICDKGFPSYFLIVA
DLINYARSVDIRVGPGRGSAAGSLVAYTLGITDIDPIEHGLLFERFLNPERASMPDIDID
FDDRRRGEMVRYAAEKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL
PPAIMAKDIPLSGITDPTHERYKEAAEIRGLIDTDPDVRTIYQTARGLEGLIRNSGVHAC
AVIMSSEPLTDVIPLWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALVNIK
ENQGIDLDLESVALDDPATFELLGRGETLGVFQLDGGPMRDLLRRMQPTGFEDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLREILAETYGLIVYQEQIMRIAQKVA
GYSLARADILRKAMGKKKREVLEKEFEGFSEGMAANGFTAKAVKALWDTILPFADYAFNK
SHAAGYGLVSYWTAYLKANYPGEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE
SRLNFASVGTDIRYGLGAVRNVGANVVASLINTREEKGKYTDFSDYLNKVDIAACNKKVT
ESLIKAGAFDSLKHPRKGLFLVHTDAVESVLGTKKAEAMGQFDLFGGDPNDGGAGADAVF
TIRVPDEEWDDKHKLALEREMLGLYVSGHPLNGVAHLLATQVDTAIPAILDGDVGNDTMV
KVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSAFGADVIDDTVVLVTAKV
AIRDDRISLIANDLVVPDFSNAQVNRPLAVSLPTRQCTIDKVTALKQVLSQHPGTSQVHL
RLLSGDRVTTLELDQTLRVTMSPALMGDLKALLGPGCLGG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgttcgtgcacctgcacaaccacaccgaatactcgatgttggacggtgcc
gcgaaggtctcgcccatgctggccgaggcgcagcggctgcagatgcccgcgatcgggatg
accgaccacggcaacatgttcggcgccagcgagttctacaacggcgccaccgcgctcggc
atcacaccgatcatcggcatcgaggcctacatcgcgccggcgtcccgcttcgagaccaag
cgcatcctgtggggtgacccggggcagaagagcgacgacgtctccggtagcggctcctac
acccacatgacgatgatggccgagaacgccaccggcctgcgcaacctgttcaagctgtcg
tcgctggcgtcgttcgagggccagctcggcaagtggtcgcggatggacgccgaactgatc
gccgagcacgcgagcgggatcatcgcgaccaccggctgcccgtccggcgaggtgcagacc
cggctgcggctcggtcaccaccgcgaggcgctggaagcggcggccaagtggcgcgagatc
ttcggcccggagaacttcttcctggagctgatggaccacggcctgtccatcgagcgccgg
gtgcgcgacgggctgctggaaatcggtcgcgcgctgaacattccgccgctggcgaccaac
gactgccactacgtcacccgcgacgccgcgcacaaccacgaggcgctgctgtgcgtgcag
accggcaagacgctcaccgacccgacgcggttcaagttcgacggtgacggctactacctc
aagtcggccgccgagatgcgcgagatctgggacaacgaggtccccggcgcctgcgactcc
accctgctgatcgccgaacgggtcacctcgtacgccgaggtgtgggcgcccaaggaccgg
atgccggtgttcccggtgcccgagggccacgacccggcgtcctggctgcgccacgaggtc
gagaacggtttgaagcgccgcttcccggccgcgacgccggacggctactccgagcgcgcc
gcctacgagatcgaagtcatctgcgacaagggattcccgtcctacttcctcatcgtcgcc
gacctgatcaactacgcccgctcggtcgacatccgggtcggccccggccgtggttccgcc
gccggatctctggtggcctacacgctgggcatcaccgacatcgacccgatcgagcacggc
ctgctgttcgagcggttcctcaaccccgagcgcgcgtcgatgcccgatatcgacatcgac
ttcgacgaccgccgacgcggcgagatggtgcgctacgccgccgagaagtggggctccgac
cgggtcgcccaggtcatcaccttcggcacgatcaaaaccaaagcggcgctgaaggattcg
gcccggatccactacggccagcccggcttcgcgatcgccgaccggatcaccaaggccttg
ccgccggcgatcatggccaaggacatcccgctgtcgggcatcaccgaccccacccacgag
cgctacaaagaggccgcggagatccgcggcctgatcgacaccgatcccgacgtccgcacg
atctaccaaaccgcccgcggactggaaggcctgatccgcaactcgggcgtgcacgcctgc
gcggtgatcatgagcagcgagccgctgaccgacgtcatcccgctgtggaagcgcgcgcag
gacggcgcgatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgttgaag
atggacttcctggggctgcgcaacctgacgatcatcggcgacgcgctggtcaacatcaaa
gagaaccaggggatagacctcgacctggagtcggtagcgctcgacgacccggccactttc
gagctgctgggtcgcggcgagacgctgggcgtgttccagctcgacggcgggccgatgcgc
gatctgctgcgccgcatgcagccgaccggcttcgaagacatcgtcgcggtgttggcgctg
taccggcccgggccgatgggcatgaacgcccacaacgactatgccgaccgcaagaacggc
cggcaggccatcaagccgattcaccccgagctcgaggagccgctgcgcgagatcctcgcc
gagacctacggcctgatcgtgtatcaggagcagatcatgcgcatcgcgcagaaagtcgcc
gggtattccctcgcccgagcagacattctgcgtaaggcgatgggtaagaagaagcgcgag
gtcttggaaaaggagttcgagggcttttcggaaggcatggcggccaacggatttacggcc
aaggccgtcaaggcgctgtgggacaccatcctgccgttcgccgactacgcgttcaacaag
tcgcacgctgccgggtacggcctggtgtcctactggacggcctacctcaaggcgaactac
ccgggcgaatacatggccggtctgctcacctccgtcggcgacgacaaggacaaggcggcg
gtgtatctggccgactgccgcaagctcggcatcaccgtgctgccgccggacgtcaacgag
tcgcggctgaacttcgcttccgtcggcaccgacatccgctacggactgggcgcggtgcgc
aacgtcggcgccaatgtcgttgcctcgctgatcaatacccgtgaagagaagggcaagtac
accgacttctccgactacctcaacaaggtcgacatcgcggcgtgcaacaagaaggtcacc
gagtcgctgatcaaggcgggtgccttcgactcgctcaagcatccacgcaagggcctgttc
ctggtgcacaccgacgcggtcgagtcggtgctcggcaccaagaaggccgaggcgatgggg
cagttcgacctcttcggcggcgaccctaatgacgggggagcgggcgccgacgcggtgttc
acgattcgggtgcccgacgaggagtgggacgacaagcacaagctcgccctcgagcgagag
atgttgggactgtacgtgtccgggcatccgctcaatggtgtcgcgcatctattggccacc
caggtcgacaccgcgatcccggcaatcctggacggcgatgtcggcaacgacaccatggtg
aaggtcggcggcatcctcgcatcggtgaaccggcgggtgaacaagaacggaatgccctgg
gcctcagcgcaattggaagaccttaccggtggcatcgaggtgatgttcttcccgcacacc
tattccgcgttcggcgccgacgtcatcgacgacacggtcgtgctggtgaccgccaaggtc
gcgatccgcgacgaccggatttcgctgatcgccaacgacctggtggtgccggacttcagc
aacgcacaggtgaatcggccgctcgcggtgagcctgccgacccgccaatgcactatcgac
aaggtcaccgcgctcaaacaggtgctctcgcaacacccgggcacctcgcaggtgcacctg
cgactgctcagcggcgaccgggtcaccacgctggagctggaccagacgctgcgggtgacg
atgtccccggcgctgatgggtgatctcaaggcgttgctcggcccgggctgcctgggcggc
tag
DBGET
integrated database retrieval system
