Candidatus Mycobacterium wuenschmannii: PT015_12920
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Entry
PT015_12920 CDS
T09639
Name
(GenBank) zinc finger domain-containing protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mwu
Candidatus Mycobacterium wuenschmannii
Pathway
mwu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mwu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PT015_12920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mwu03400
]
PT015_12920
Enzymes [BR:
mwu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PT015_12920
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PT015_12920
DNA repair and recombination proteins [BR:
mwu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PT015_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
TMEM106_N
DUF7577
DUF2752
Motif
Other DBs
NCBI-ProteinID:
WIM90324
LinkDB
All DBs
Position
complement(2732432..2732890)
Genome browser
AA seq
152 aa
AA seq
DB search
MAALGPDALQLSQTDLATLLAKNTGRIKGVITDQKVIAGIGNAYSDEILHVARLSPFATA
AKLTEAQLAALYDAMVSVLSDAVGRSVGQQAAELKGEKRSGMRVHARTGLPCPVCGDTVR
EVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atcgccgcacttggcccagatgccttgcagctcagccaaactgacctcgccaccctgctg
gcaaagaacaccggccggatcaaaggcgtcatcaccgaccagaaagtcatcgccggcatc
ggcaacgcgtacagcgacgagatcctgcacgtcgccaggctgtcgccgttcgccaccgcg
gccaaactcaccgaggcccaactcgcagccctgtacgacgcgatggtgtcggtcctgtcc
gacgcggtcggcagatcggtcggccagcaggccgccgagctgaagggcgagaagcgttcg
ggaatgcgggtgcacgcgcgcaccggcctgccgtgcccggtctgcggcgacaccgtccgc
gaagtgtcgttcgccgacaagtcgtttcagtactgcccgacctgccagaccggcggcaaa
gttcttgccgatcggcggatgtcacgcctgctgaaatag
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