Candidatus Mycobacterium wuenschmannii: PT015_13705
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Entry
PT015_13705 CDS
T09639
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mwu
Candidatus Mycobacterium wuenschmannii
Pathway
mwu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mwu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PT015_13705
09124 Replication and repair
03420 Nucleotide excision repair
PT015_13705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mwu03021
]
PT015_13705
03400 DNA repair and recombination proteins [BR:
mwu03400
]
PT015_13705
Enzymes [BR:
mwu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PT015_13705
Transcription machinery [BR:
mwu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PT015_13705
DNA repair and recombination proteins [BR:
mwu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PT015_13705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
WIM85988
LinkDB
All DBs
Position
2904554..2906203
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSFDRAVLEEVL
RHKKIAPMLGARIDDDTVAVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLQQDGW
ELRDYQEMAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKASATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMIYATAEPEERYKLCSTAHSKVAVVKSILNKHPGEPTLVIGAYLD
QLEELGTLLEAPVIQGSTKNAEREALFDAFRRGEVSTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYVIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggacccctgatcgtgcagtccgacaagacagtgctactggaagtcgaccac
gagctcgccggcgcggcgcgtgccgccatcgcgccgttcgccgaactggagcgggcaccc
gagcacgtgcacacctatcgggtcaccccgttggcgctgtggaacgcccgcgccgccggc
cacgacgccgagcaggtggtcgacgcgctggtcagcttctcgcggtacgcggtcccgcaa
ccgctgctggtcgacatcgtcgacacgatggcgcgttacggccggctgcagctggtcaaa
agcccggtgcacggcctcactctggtcagcttcgaccgcgcggtgctcgaagaagtgttg
cggcacaagaagatcgcgccgatgctgggcgcgcgcatcgacgacgacacagtggcggtg
catcccagcgagcgcggccgggtcaagcagatgctgctcaagatcggttggcccgctgag
gatctcgccggttacgtcgacggcgaggcccatccgatcagcctgcagcaggacggctgg
gagttacgcgactatcaggagatggcggccgactcgttctgggccggcggctcgggcgtg
gtcgtgctgccctgcggtgcgggtaagacgctcgtcggcgccgcggcaatggcgaaggcc
agcgcgacgacgctgatcctggtcaccaacaccgtcgcgggccggcagtggaagcgtgag
ttgatcgcgcgaacgtcgttgacggaagaggagatcggcgagtactccggtgagcgcaag
gaaattcgccccgtcaccatcgcgacgtaccaggtgatcacccgccgcaccaagggcgag
taccgccacctggagttgttcgacagccgcgactgggggctcatcgtctacgacgaggtg
cacctgttgccggcgccggtgttccggatgaccgccgacctgcagtcccgtcgtcggctc
gggctcaccgcgacgctgatccgcgaggacggccgcgagggtgacgtcttctcgctgatc
ggcccgaagcgctacgacgcgccgtggaaagacatcgaggcccagggctggattgcgccg
gcggagtgcatcgaggtccgcgtcacgatgaccgacaacgagcggatgatctacgccacc
gccgaacccgaggagcgctacaagctctgctcgaccgcgcactcgaaagtcgctgtggtg
aagtcgattctgaacaagcacccgggtgagccgaccctggtgatcggcgcctacctcgac
caactcgaagaactcggaacgctgctggaggccccggtgattcaggggtcgaccaagaac
gccgaacgcgaggccttgttcgatgccttccgccgcggcgaggtgagcaccttggtggtg
tcgaaggtggcgaacttctccatcgacctaccggaagcgtctgtggcagtacaggtttcg
ggaaccttcggatcgcggcaggaagaggcgcagcgactgggccggctgctgcgccccaag
gccgacggcggcggggcggtgttctactcggtggtcgcccgcgacagcctcgacgcggag
tacgccgcacaccggcagcgctttctggcagagcagggctacggctacgtcattcgcgac
gccgacgacctgctcggtccggcgatctga
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