Candidatus Mycobacterium wuenschmannii: PT015_15960
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Entry
PT015_15960 CDS
T09639
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mwu
Candidatus Mycobacterium wuenschmannii
Brite
KEGG Orthology (KO) [BR:
mwu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mwu03032
]
PT015_15960 (topA)
03400 DNA repair and recombination proteins [BR:
mwu03400
]
PT015_15960 (topA)
Enzymes [BR:
mwu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PT015_15960 (topA)
DNA replication proteins [BR:
mwu03032
]
Prokaryotic type
DNA Topoisomerases
PT015_15960 (topA)
DNA repair and recombination proteins [BR:
mwu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PT015_15960 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WIM86395
LinkDB
All DBs
Position
complement(3329647..3332451)
Genome browser
AA seq
934 aa
AA seq
DB search
MADSGGNGATRRLVIVESPTKARKLAGYLGANYIVESSRGHIRDLPRAAADVPAKYKSEP
WARLGVNVDADFEPLYIISPDKKSTVTELKGLLKDVDELYLATDGDREGEAIAWHLLETL
KPRVPIKRMVFHEITEQAILDAAANPRDLDIDLVDAQETRRILDRLYGYEVSPVLWKKVA
PKLSAGRVQSVATRIIVQRERDRMAFRSAAYWDVVAELDASVSDPKASPPRFNARLTSVD
GLRVATGRDFDSLGAVRKPDEVTVLDEAGAVSLATGLRGQQLTVGSVEEKPYTRRPYPPF
MTSTLQQEAGRKLRFSAERTMSLAQRLYENGYITYMRTDSTTLSQSAINAARTQARQLYG
EEYVHPSARQYTRRVKNAQEAHEAIRPAGETFATPDGLRRELDNDEFRLYELIWQRTVAS
QMADARGTTLSLRINGESGDRQVQFSASGRTITFAGFLKAYVETVDELAGGEADDAESRL
PQLTQGQRVDASELTPDGHSTNPPARYTEASLIKALEELGIGRPSTYSSIIKTIQDRGYV
HKKGSALVPSWVAFAVIGLLEQHFGRLVDYGFTAAMEDELDAIASGTERRTNWLNNFYFG
GEHGVDDSIARSGGLKKLVGVNLEGIDAREVNSIKLFDDAEGRTVNVRVGRNGPYLERMV
TGDDGELTPQRANLHDSLTPDELTLEVAEELFSTPQEGRSLGVDPESGHEIVAKDGRYGP
YVTEVLPKPDDDDGAAGQPAKKGKKPTGPKPRTGSLLRSMDLQTVTLEDALKLLSLPRVV
GIDPESKEEITSQNGRYGPYLKKGTDSRSLATEDQIFSVTLEEALKLYAEPKRRGRQGAA
APPLRELGTDAASGKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDARASELLADRRA
RGPVKKTAKKAAAKKSPAKKAAKKTTAKKAAKRS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatagcggcgggaatggcgccacacggcgactcgtcattgtcgagtcgcccacc
aaagcgcgcaaattggccggctatctgggcgcgaactacatcgtcgagtcctcccgcggt
cacattcgtgacctgccccgggcggcggccgacgtgcccgcgaagtacaagtccgagccc
tgggcacgcctcggggtcaacgtcgacgccgacttcgagccgctctacatcatcagccca
gacaagaagagcacggtcaccgagctcaaaggcctgctcaaagacgtcgacgagctctac
ctggccacggatggtgaccgcgagggcgaggcgatcgcctggcacctgctcgagaccctc
aaaccgcgcgtcccgatcaagcggatggtcttccacgagatcaccgagcaggcgatcctg
gacgccgccgcaaatccgcgtgacctcgacatcgacctcgtcgacgcccaagagacccgc
cgcatcctggaccggttgtacggctacgaggtcagcccggtgttgtggaagaaggtggcg
cccaagctgtccgcgggccgggtccagtcggtggccacccgcatcatcgtgcagcgcgaa
cgtgaccggatggcgttccgcagcgcggcctactgggacgtggttgccgagctagatgcc
agcgtctccgacccgaaggcgtcgccgccgcgcttcaacgcccggctgacctcggtcgac
ggcctgcgggtcgcgaccggccgcgacttcgactccctcggcgcggtgcgcaagcccgac
gaggtgaccgtcctcgacgaggccggcgccgtgtcgctggccaccggcctgcgcgggcag
cagctgaccgtcggctcggtcgaggaaaagccctacacccgtcgcccgtatccgccgttc
atgacgtcgacgctgcagcaggaggccggccgcaagctgcggttctccgcggagcgcacg
atgagcctcgcccagcggctgtacgagaacggctacatcacctacatgcgcaccgactcg
accacgctgtcgcagtcggcgatcaacgcggcccgtacacaggcccggcagctctacggc
gaggagtacgtccacccgtctgctcggcagtacacccgcagggtgaagaacgcgcaggag
gcccacgaggccatccggccggccggtgaaacgttcgccactcccgacgggttgcggcgc
gagctggacaacgacgagttccggctctacgagctgatctggcagcgcacggtcgcgtcg
cagatggccgacgcccgcgggaccacgctgagcctgcggatcaacggcgagtcgggcgat
cgtcaggtgcagttcagcgccagcggccggaccatcacgttcgccggattcctcaaggcc
tacgtcgagaccgtcgacgaactcgccggaggcgaggccgacgacgccgagagccggttg
ccgcagctgacccaggggcaacgggtcgacgccagcgagctgaccccggacggccactcc
accaatccgccggcccgctacaccgaggcctccctgatcaaggcactcgaagagctcggc
atcggccggccgtcgacgtattcgtcgatcatcaagaccatccaggaccgcggctatgtc
cacaagaagggcagcgcgctggtcccgtcgtgggtcgcgttcgccgtgatcggtttgctg
gagcagcatttcggccggctcgtcgactacggcttcaccgccgcgatggaagacgaactc
gacgcgatcgcatccggcaccgagcgacgcaccaactggctcaacaacttctacttcggc
ggcgagcacggtgtcgacgactcgatcgcgcgatcgggcgggctgaagaagctggtcggc
gtcaacctcgaaggcattgacgcacgagaagtcaactccatcaagctttttgacgacgcc
gagggccgcacggtcaacgtgcgcgtcggacgcaacgggccctatctcgagcggatggtg
acgggtgacgacggcgagctcacgccgcagcgggccaatctgcacgactcgctgactccc
gacgagctcacgctggaggtcgccgaagagctgttctcgacgccgcaggaaggccgctcg
ctgggcgtcgacccggagtccgggcacgagatcgtcgccaaggacggccgctacggtccc
tacgtcaccgaggtgctgcccaagccggacgacgacgacggcgccgcgggccagccggcg
aagaagggcaagaagccgaccgggcccaagccgcgcaccgggtcgctgctgcgcagcatg
gacctgcagaccgtgacgctcgaggacgccctcaagctgctctcgctgccgcgggtggtc
ggcatcgacccggagtccaaggaggagatcacctcgcagaacggccgctacgggccgtat
ctgaagaagggcaccgactctcggtcgctggccaccgaagatcagatcttctcggtgacg
ctggaagaggcgctgaagctctacgccgagccgaagcggcgtggccgccagggtgcggcg
gcaccgccgctgcgcgaactcggcaccgatgctgcctcgggcaagccgatggtgatcaag
gacggccggttcggcccctacgtcaccgacggcgagaccaacgcgagcctgcgcaagggc
gacgacgtgctgtcgatcaccgacgcgcgggcgtccgagttgctggccgatcggcgcgcc
cgtggaccggtgaagaagaccgccaagaaagccgccgccaagaagtctccggccaagaaa
gccgccaagaagacgacggcgaagaaggcggcaaagcgcagctag
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