Candidatus Mycobacterium wuenschmannii: PT015_21805
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Entry
PT015_21805 CDS
T09639
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mwu
Candidatus Mycobacterium wuenschmannii
Pathway
mwu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mwu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PT015_21805 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mwu03400
]
PT015_21805 (recD)
Enzymes [BR:
mwu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PT015_21805 (recD)
DNA repair and recombination proteins [BR:
mwu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PT015_21805 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
Helicase_RecD
RecD_N
PhoH
SH3_13
AAA_16
TraI_hel_assoc_N
nSTAND3
AAA_28
Herpes_Helicase
Mg_chelatase
DO-GTPase1
SRP54
MukB
NTPase_1
AAA_5
CbiA
TrwB_AAD_bind
AAA_29
AAA
ATPase
SLFN-g3_helicase
NACHT
ABC_tran
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WIM87443
LinkDB
All DBs
Position
complement(4534915..4536621)
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AA seq
568 aa
AA seq
DB search
MTLLEVELAVGAGGLLGSFNEAGVLDVSDVRVAERICVLGKESDERVALAVALLVRGLRG
GSVCIELESIAGAVGVDDLPWPASADWLAAVAASPLLGQVLHLYDERLLYLDRYWREEKQ
VCDELLSLQASGPGGDMPASERLFPTGFEEQRAAAEIALTQAVTVLTGGPGTGKTTTVAR
LLALLAEQAGASRLRIALAAPTGKAAARLLEAVQLEVAKLDALDRERLGQLHAMTLHRLL
GSKPDTSSRFRHNRGNRLPHDVIVVDETSMVSLTMMARLLEAVRPGSRLILVGDADQLAS
VDAGAVLADLVDGISGRSDMAVATLKTSHRFGETIGQLAEAIRIGDADRAIELLRAGGEH
IEFIEAEDASDALRPVLLPHALKLREAALYSASDDALATLDEHRLLCAHRSGPNGVQHWN
RQVEKWLSEETGQPPWAEWYPGRPLLVTANDYALRIFNGDTGVVANGPDGLRAVIAGAGG
ALDFATSRLSDVETMHAMTIHKSQGSQADEVTVLLPGEDSRLLTRELFYTAVTRAKEKAR
VVGSEASVRAAIERLAVRATGLRVRLTQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgactcttctcgaggtcgaactggcggtaggcgctggcggcttgttgggttcgttcaac
gaggctggcgtgcttgatgtttcggatgtacgggtggctgagcggatttgcgtgctcggc
aaggagtccgacgagcgggtggcgctggcggtggcactgctggtgcgcgggttgcggggg
ggctcggtgtgcatcgagctggagtcgatcgctggtgctgtcggtgttgacgacttgccg
tggcccgcttctgcggattggcttgcggcggtcgcggccagcccgttgctcggccaggtg
ttgcatctctacgacgagcggctgctgtacctggaccggtactggcgcgaggagaagcag
gtctgcgacgaattgctgtcgttgcaagcgtcagggccgggcggtgatatgcctgcctcc
gagcgacttttcccgaccggtttcgaagagcagcgggctgcggcggaaatcgcgctgacg
caggcggttacggtgctgactggcggcccggggaccggcaagacgacgacggttgcgcgg
ttgctggcgttgcttgccgaacaggcgggcgcatcgcggctgcggatcgcgcttgcggcg
ccgacgggcaaggcggcggcgcggcttctcgaggcggtgcaactcgaggtggccaagctg
gatgctttagaccgtgagcggcttggtcagctgcacgcgatgacgttgcaccggctgttg
ggcagcaagcccgacacgtcatcacggtttcggcacaatcgcggaaatcggttgccacac
gacgtgattgtcgtcgacgagacgtcgatggtgtcgctgacaatgatggcgcggttgctt
gaggctgtacgtcccggttcgcggctgatcctggtcggtgacgctgaccagttggcgtcc
gtggacgcgggcgcggtgctggctgatctggtggatgggatttcggggcgcagcgacatg
gctgtagcgacgctgaaaacgtcgcatcggtttggtgagacgatcggccaactagcggaa
gcgattcggatcggcgacgctgaccgcgccatcgaactcttgcgtgccggcggcgagcac
atcgagttcatcgaagccgaggacgcatctgacgcgttgcgcccggtgttgttgccgcac
gcgttgaagctccgcgaggccgcgctctactccgcgagcgatgatgctttggcgacgctc
gacgagcacaggctgttgtgcgcgcaccggtcgggaccgaacggggtgcagcactggaat
cgtcaggtggagaagtggctgtccgaggagaccggccagccgccgtgggcggaatggtac
ccaggtcggcccttgttagtgaccgccaatgattacgcgctgcgcatcttcaacggcgac
accggcgttgtcgcgaacgggccggacggacttcgagctgttatcgccggcgccggaggt
gcattggactttgcgacgagtcggctgtccgacgtcgagacgatgcatgcgatgacgatt
cacaagtcgcagggcagtcaagccgatgaggtgactgtgcttctgccgggcgaggattcg
cggctgctgacgcgggagttgttctatacggcggtgactcgggcgaaggagaaagcacgg
gtcgtcgggtctgaggcatccgtgcgcgccgcgatcgaacggctggcggttcgtgcgaca
gggctgagggtgaggttgactcagtga
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