Candidatus Mycobacterium wuenschmannii: PT015_22780
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Entry
PT015_22780 CDS
T09639
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mwu
Candidatus Mycobacterium wuenschmannii
Pathway
mwu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mwu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PT015_22780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mwu03021
]
PT015_22780
03400 DNA repair and recombination proteins [BR:
mwu03400
]
PT015_22780
Enzymes [BR:
mwu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PT015_22780
Transcription machinery [BR:
mwu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PT015_22780
DNA repair and recombination proteins [BR:
mwu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PT015_22780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WIM87627
UniProt:
A0ABY8VY38
LinkDB
All DBs
Position
4720543..4721589
Genome browser
AA seq
348 aa
AA seq
DB search
MLISQRPTLSEEVISDSRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKSLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PEMHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKSSIGPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPASFDPSEVAGYDVATGTWSAEAAAYDDQDYAETEQL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttcacagcggccgactttgtccgaagaggtcatcagcgacagccgttcgcag
ttcgtcatcgagccgttggagccgggtttcggctacacgctgggtaactcgctgcggcgc
acgctgctgtcctcgatcccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccacggtgccgggggtcaaggaagacgtcaccgacatcatcctgaacctg
aagagcctggtcgtatcgtccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggcgaggtcaccgcgggtgacatcgtgccgccggccggcgtcaccgtgcacaac
cccgagatgcacatcgcgaccctgaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcgtgggcgcggttacgtcccggccgtgcagaacaaggcgtcgggtgccgaaatcggc
cgcatcccagtcgattccatctactcgccggttctgaaggtcacctacaaggtggacgcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagagc
tcgatcggcccccgggacgcgctggcgtccgcgggtaagacgctggtcgaattgttcggt
ctggcgcgggaactcaacgtcgaggccgagggcatcgagatcggcccgtcgcctgccgag
gccgaccacatcgcgtcgttcgcgctgccgatcgacgacctggatctgaccgtgcgctcg
tacaactgcctcaagcgcgagggcgtgcacaccgtcggcgaactggtctcgcgcaccgag
tccgacctgctcgacatccgcaacttcggtcagaagtccatcgacgaggtgaaggtcaag
ctgcaccagctgggtctgtcgctcaaggacagcccggccagcttcgacccgtcggaggtc
gcgggctacgacgtggcgaccggtacctggtccgccgaggcagccgcctacgacgaccag
gactacgccgaaaccgaacagctgtaa
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