Myxococcus xanthus: MXAN_0064
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Entry
MXAN_0064 CDS
T00366
Name
(GenBank) conserved hypothetical protein, UPF0027 family
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mxa
Myxococcus xanthus
Brite
KEGG Orthology (KO) [BR:
mxa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mxa03016
]
MXAN_0064
Enzymes [BR:
mxa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MXAN_0064
Transfer RNA biogenesis [BR:
mxa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MXAN_0064
Prokaryotic type
tRNA splicing ligases
MXAN_0064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF6301
Motif
Other DBs
NCBI-ProteinID:
ABF85892
UniProt:
Q1DG76
LinkDB
All DBs
Position
complement(73389..74741)
Genome browser
AA seq
450 aa
AA seq
DB search
MSWKQRLEKVSEGHYVLAKTKSMKVDADLFLSDKLLWGEGPEQPGLEDSVFDQVVNAASF
PGVTRVAVTPDCHLGYGVPIGTVVETDGILLPTAAGYDIGCGMVQLQTTLTAEDVADATK
RRRWIEEVTKRIAVGVGASRVQKQRRVTDRTFADVVRHGAKALGRGSSVTERDYIPVEDD
RVDIPERAFGKREQLGSLGGGNHFTEMQVDQDGRVWVMLHTGSRGFGWNIAKHFFVEGAA
QLGLKSRSEDHVWLDAESPLGRDYWNLHNMAANFAVANRLIIGEAVCAALEDVFGGTASV
YYEISHNLIQKEAGKFVARKGATRAFPGGHPALKGTPWEKTGHPILIPGSMETGSAILFA
EPGAQKSIYSVNHGSGRRMSRGEARRVLKQDVTDKRMAEAGILLNTRQTPLDESGPCYKN
LDDVLETVEMAGLARVAYRLKPVACIKGAD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagttggaagcagcggctggagaaggtctcagagggccattacgtcctggcgaagacc
aagagcatgaaggtcgatgcggacctgttcctgtccgacaagttgctgtggggggagggc
cccgagcaacctggactggaggactctgtctttgaccaggtggtgaatgcggcatccttc
cccggggtcacccgcgtggctgtcacacccgactgtcacctgggctacggcgtccccatt
ggcacggtggtggaaacggacggcatcctcctgcccaccgccgccggctacgacatcggc
tgcgggatggtgcagttgcagacgacgctcaccgccgaggacgtcgccgacgccacgaag
cgccgccgctggattgaagaggtgacgaagcgcatcgccgtgggcgtgggcgccagccgc
gtgcagaagcagcgcagggtgacggaccgcaccttcgcggacgtggtgcgccacggcgcc
aaggccctgggccggggttcgtccgtcaccgagcgcgactacatccccgtcgaggatgat
cgggtagacatccccgagcgcgccttcggcaagcgtgagcaactgggcagcctgggcggc
ggcaaccacttcaccgagatgcaggtggaccaggacggccgcgtgtgggtgatgctgcac
accggcagccgcggcttcgggtggaacatcgccaagcacttcttcgtggagggcgccgcg
cagctgggcctcaagagccgcagcgaggaccatgtctggctggacgcggagagcccgctg
ggccgcgactactggaacctccacaacatggcggccaacttcgcggtggccaaccggctc
atcatcggtgaggcggtgtgcgcggcgctggaggacgtcttcggcggcacggccagcgtg
tattacgaaatctcccacaacctcatccagaaggaggcggggaagttcgtcgcccgaaag
ggcgccacgcgcgcgttccccggaggacaccccgcgctgaagggcacgccctgggagaag
acgggccaccccatcctcatcccgggctccatggagacgggcagcgccatcctcttcgcc
gagccgggcgcacagaagtccatctattcggtgaaccacggctctggccgccgcatgtcg
cgcggcgaggcgcggcgcgtgctgaagcaggacgtcaccgacaagcgcatggccgaggcg
ggcatcctcctcaatacccgccagacgccgctggacgagtccggcccctgctacaagaac
ctggacgacgtcctggagacggtggagatggcggggctggcccgggtggcctaccggctc
aagccggtggcctgcatcaagggcgcggactga
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