Myxococcus xanthus: MXAN_4081
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Entry
MXAN_4081 CDS
T00366
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mxa
Myxococcus xanthus
Pathway
mxa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mxa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MXAN_4081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mxa03019
]
MXAN_4081
Enzymes [BR:
mxa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MXAN_4081
Messenger RNA biogenesis [BR:
mxa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MXAN_4081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABF90945
UniProt:
Q1D514
LinkDB
All DBs
Position
complement(5026443..5027948)
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AA seq
501 aa
AA seq
DB search
MTFDDLQLHDTLLRAVKAEGYTTPTPIQQKAIPHALAGRDVLGVAQTGTGKTAAFALPIL
QRLSAKAPAGGARPVRCLVLTPTRELAGQVGDSFGTYGKGLPLRHAVIFGGVGQNPQVQT
LRNGVDVLVATPGRLLDLMEQGFVSLRSLEVFVLDEADRMLDMGFIHDVRRVIKALPPKR
QTLFFSATLPPDIVDLARSILTDPIRVEVTPASSTAETVSQQVYFVEREQKRGLLTHLLK
EGNIHRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVA
TDIAARGIDIDGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIE
RTIRRNVPVVEDHPYRSGQPAPRPVSHASGAAPEARPSGNGGRPQGTPRPAGNGGGGGHS
AGASRRRRGGRGGAGGGGRGQGRPEGGRSAQGSGGSGGNASRGGQGGSRGSGGGRPAVAQ
APAKAPEASPLPPRRPSPKWF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgacgatcttcagcttcacgacaccctcctgcgcgccgtcaaggcagagggt
tacaccacccccacgcccatccagcagaaggccatcccccacgcgctggccgggcgggat
gtactcggcgtggcccagacgggcacgggcaagacggcggccttcgcgctgcccatcctc
cagcggctgtccgccaaggcgcccgcgggcggggcgcgcccggtgcgctgcctggtcctg
acgcccacgcgcgaactggcgggtcaggtgggtgacagcttcgggacctacggcaagggg
cttcccctgcgtcacgccgtcatcttcggtggcgtgggccagaatccgcaggtccagacg
ctgcgcaatggcgtggatgtgctggtggccacgccgggccgcctgctcgacctgatggag
cagggcttcgtgtcgctgcgctcgctcgaggtattcgtgctcgacgaggcggaccgcatg
ctcgacatgggcttcatccacgacgtgcggcgcgtcatcaaggcgctgccgcccaagcgg
cagacgctgttcttcagcgccacgctgcccccggacatcgtggacctggcgcgcagcatc
ctcacggaccccatccgcgtggaggtgacgccggcgtccagcaccgcggagacggtgagc
cagcaggtgtacttcgtggagcgcgagcagaagcgcgggctgctgacgcacctgctgaag
gaaggcaacatccaccgcgcgctcgtcttcacccgcaccaagcacggcgcgaaccgggtg
gcgaagcagttggagggcgcgggcgtcagctcggcggccatccacggcaacaagagccag
aacgcccgtgagcgcgcgctcgacgagttccgctccgggacgctccgcgtgctcgtggcc
acggacatcgccgcgcgcggcatcgacatcgacgggctgagctacgtcgtcaactacgac
ctgcccaacgtgccggagcagtacgtgcaccgcattggccgcaccggccgcgcgggggcc
agtggcaccgctgtgtccttctgcgacgccgaggagcgcgcgtacctgcgcgacatcgag
cgcaccatccgccgcaacgtgcccgtggtggaggaccatccgtaccgctcgggccagccc
gcgccgcgtcccgtgagtcatgcgtccggcgccgcgccggaggcccgcccttcgggcaac
ggtgggcggccccagggcacgccgcgtcccgcgggcaacggtggtggaggcgggcactcc
gcgggggcttcgcgccgccgccgggggggccgtggtggcgctggcggcggaggccgtggg
cagggtcgtcccgagggtggccgctcggcgcagggctcgggtggctccggtggcaacgcc
agccggggtggccagggcggttccaggggttcgggtggcggccgtcccgcggtggcgcag
gctccggcgaaggcccccgaggcctccccgcttcctccgcgtcgcccatcgcccaagtgg
ttctga
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integrated database retrieval system
