Mycobacterium xenopi: MYXE_12500
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Entry
MYXE_12500 CDS
T06649
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mxe
Mycobacterium xenopi
Pathway
mxe03420
Nucleotide excision repair
mxe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYXE_12500 (uvrD1)
03430 Mismatch repair
MYXE_12500 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mxe03400
]
MYXE_12500 (uvrD1)
Enzymes [BR:
mxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MYXE_12500 (uvrD1)
DNA repair and recombination proteins [BR:
mxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYXE_12500 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MYXE_12500 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBU21461
UniProt:
A0AAD1GZ13
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All DBs
Position
1278494..1280803
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AA seq
769 aa
AA seq
DB search
MTAGDDARRSDEEEQRILSVHVTDAKPAREAEQLLDGLNPQQRQAVLHEGSPLLIVAGAG
SGKTAVLTRRIAYLMAARDVGAGQILAITFTNKAAAEMRDRVVQLVGARARSMWVSTFHS
MCVRILRNHASLIAGLNSNFSIYDADDSRRLLQMVGRDMGLDIKRYSPRLLANRISNLKN
ELIDPEKAAASVSDGTDELARTVAAVYAEYQRRLRAANALDFDDLISETVWVLQTFPQIA
QHYRRRFRHILVDEYQDTNHAQYVLVRELVGRDVEDEVPPGELCVVGDADQSIYAFRGAT
IRNIEDFERDYPDATTILLEQNYRSTQNILSAANSVIARNSGRRDKRLWTDAGAGELIVG
YVADNEHDEARFVAEEIDALVERGEITYQDVAVFYRTNNSSRSLEEVFVRAGIPYKVVGG
VRFYERKEIRDVVAYLRVLDNPGDAVSLRRILNTPRRGIGDRAEACVAVYAENIGASFAD
ALVAAAEGKVPMLNSRSAKAISGFVELLDDLRGRLGDDLGELVEAVLDRTGYRAELEPSS
DPQDLARLDNLNELVSVAHEFSIDRANATAFDESLHTPEDEDVPDTSVLAEFLERVSLVA
EADEIPEQNSGVVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRALDDPSELSEERRLAYV
GITRARQRLYVSRAKVRSSWGQPMLNPESRFLREIPQELIDWRRSDPAPSVSAPVTGAGR
FGAPRPSPARSTAAGVHCWCFNPATGSRTTSTGWAGWRKFPGSATRRCH
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccggtgacgatgcacggcgaagcgatgaggaggagcagcgcatattgagcgtg
catgtgaccgatgccaagcccgcccgtgaagcagagcaactcctcgacgggctcaacccc
cagcagcgacaggccgttttgcacgagggttcgccgctgctgatcgtcgccggcgcaggc
tcgggcaagacggcggtgctgacccgccgcatcgcctacctgatggcggcgcgcgacgtc
ggcgcggggcagatattggcgatcaccttcaccaacaaggcggccgccgagatgcgcgac
cgtgtggtgcagctcgtcggagcgcgcgcgcgctcgatgtgggtatcgacgtttcactcg
atgtgcgtgcggatcttgcgcaatcacgcctcgctcatcgcgggcctgaattccaacttt
tcgatctatgacgccgacgattcccgacgcctgctgcagatggtcggcagggatatgggt
cttgacatcaagcggtactcgcctcgtctgctggccaaccgcatttccaacctgaagaac
gagctgatcgaccccgaaaaagcggcggccagcgtgtccgatggtaccgacgagctcgcc
cgcacggtcgccgcggtctacgccgaatatcagcggcggctgcgcgcggccaatgcgctg
gacttcgatgacctgatttcagagaccgtttgggtattgcagacgttcccgcagatcgcc
cagcattaccggcgccggttccggcacattctggtcgacgagtaccaggacaccaaccac
gcccagtatgtgctggtgcgggaattggtcggtcgtgatgtggaagacgaagtccctccc
ggcgagttatgcgtggtcggcgacgccgaccagtcgatctatgcgtttcgtggcgccacc
atccgcaacatcgaagacttcgaacgcgactacccggacgccacaacgattctgctggaa
cagaattaccgctccacccaaaacattctgtctgcggccaactcggtgatcgcacgcaac
tccgggcggcgcgacaagcgcctgtggaccgatgccggtgcgggcgagctgatcgtcggt
tatgtcgccgacaacgaacacgatgaagcgaggtttgtcgccgaggagatcgacgcactc
gtcgagcgcggcgaaatcacctaccaggatgtggccgtcttctaccgcaccaacaactcg
tcgcggtcgttggaagaagtattcgtccgcgctggcatcccctacaaagtcgttggggga
gtgcggttttacgagcgcaaggagatccgcgacgtcgtcgcctacctgcgggttctggac
aacccaggcgacgcggtcagtcttcggcgcatcctcaacacaccgcggcgcggcatcggt
gaccgggccgaggcgtgtgtagcggtgtacgccgagaacatcggtgccagctttgccgac
gcgctggtcgccgcggccgaaggcaaggttccgatgttgaactcccgttcggcgaaagcg
atctcgggcttcgtcgaactgctcgacgatctgcggggccgtctcggcgacgacctcggc
gagctggtggaggccgtgttagaccggaccggataccgcgccgaactcgagccctccagt
gatccacaggatttggcccggcttgacaatctcaacgaacttgtaagcgtcgcacacgaa
ttcagtattgaccgggcgaacgccaccgccttcgacgagtctttacacactcccgaagac
gaagacgtgcccgacaccagcgtgctggcggagttccttgagcgggtgtcgctggtcgcc
gaggccgacgagatccccgagcagaattcaggcgttgtcaccctgatgaccctgcacacg
gcgaagggcttggagttcccggtggtgttcgtgaccggttgggaggacgggatgttcccg
cacatgcgggcgctggatgatccgagcgagctctccgaggaacgccggctggcctacgtc
ggcattacccgggcccgccaacggctctacgtgagccgcgccaaggtccgctcgtcgtgg
ggccagccgatgctgaatccggaatcgcggttcttgcgggagatcccgcaagagctcatc
gactggcgacgcagcgatccggcaccgtcggtcagcgcaccggtgaccggcgccggccga
ttcggcgccccccgcccctcgccggctcgctcgacggcggccggcgtccactgctggtgc
ttcaacccggcgacagggtctcgcacgacaagtacgggctgggccgggtggaggaagttt
ccggggtcggcgactcggcgatgtcactga
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