Mycobacterium xenopi: MYXE_15690
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Entry
MYXE_15690 CDS
T06649
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mxe
Mycobacterium xenopi
Pathway
mxe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mxe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYXE_15690 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mxe03019
]
MYXE_15690 (deaD)
03009 Ribosome biogenesis [BR:
mxe03009
]
MYXE_15690 (deaD)
Enzymes [BR:
mxe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYXE_15690 (deaD)
Messenger RNA biogenesis [BR:
mxe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MYXE_15690 (deaD)
Ribosome biogenesis [BR:
mxe03009
]
Prokaryotic type
rRNA helicases
MYXE_15690 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Ribosomal_S11
CMS1
UvrA_inter
LytR_C
Motif
Other DBs
NCBI-ProteinID:
BBU21780
UniProt:
A0AAD1H006
LinkDB
All DBs
Position
1593392..1595092
Genome browser
AA seq
566 aa
AA seq
DB search
MTSSDIAAERLPAAFDDLQIHPSVLRAIAEVGYESPSAIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPILSRIDTTSNATQALVLAPTRELALQVSEAFSRYGAHLPRLTALPIYGGA
SYSVQLAGLRRGAQVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEMLAMGFAEDVERI
LSDTPEYKQVALFSATMPPAIRAITAKYLHEPLEITVEAKTTTAENISQRYIQVAGPRKM
DALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQTQRERTITALKD
GGLDILVATDVAARGLDVDRVSHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE
RHLLKAIEKATRQRLIEAELPTVDDVNAQRVAKFADSITDALGSPGMELFRSLVEDYERE
HDVPMVDIAAALALQSRDGEEFLMAPEPPEPPRSRRTERRPAKPVRTAGTGMATYRIAVG
KRHRVGPGAIVGAIANEGGLHRSDFGHITIERDFSLVELPARLPRATLKALEHTRISGVL
INLRPDRATRNGRRRDGAKPRRKPAG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctccgacatcgcggctgagcggttgcccgccgccttcgacgacctgcagatc
cacccatcggttctgcgggcgatagccgaggtcggctacgaatcaccgtcggccattcag
gcggcgacaattccggcgctgatggccgggtccgacgtggtggggctagcccagacgggc
acgggtaagaccgcggccttcgcgatcccgatcctgtccaggatcgacaccaccagcaac
gccacccaagcgctggtgctggcgccgacccgcgaactggcgctgcaggtgtcggaggcg
tttagccgctacggcgcccacttgccgcggctgacggcgctgccgatctacggcggcgcg
tcctacagtgtgcagctggccgggctcaggcgcggcgcccaggtggtcgtcggaactccc
ggccgggtcatcgatcacctggaacgcgggacactcgacctgtcccgggtggactatctg
gtgctcgacgaagccgacgagatgctcgcaatgggtttcgccgaggacgtcgaacgcatt
ctgtccgacaccccggagtacaagcaggtggccctgttttcggcgacgatgccgccggct
atccgcgccattaccgccaaatatctgcatgagccgctcgaaatcactgtcgaagccaaa
accacgacagcggagaatatttcgcagcgttacatccaagtggccggtccccgcaaaatg
gacgcgctgaccagggtgctcgaagtcgagcccttcgaggcgatgatcgtcttcgtccgc
accaagcaggccaccgaagaagtcgccgaaaagctgcgtgcccgagggttttccgcggcc
gcgatcaacggcgacattccgcagacacagcgcgagcgcacaatcacggcgctcaaagac
ggcggtctcgacattctggtcgccaccgacgtggcggcccgcggactggacgtagaccgg
gtgtcgcatgtgctcaactacgacatcccgcatgacaccgagtcttacgtgcaccggatc
ggccgcaccggcagggcgggacgttcgggaaccgcgctgctgttcgtctcaccgcgagag
cgccacctgctcaaggcgatcgaaaaggcaacgcgccaaaggcttatcgaagccgaattg
cccaccgtcgacgacgtcaacgcccagcgggtggccaaattcgccgattccatcaccgac
gcgctgggctcgccgggcatggagctgttccgcagcctggtcgaagactacgaacgcgaa
cacgacgttccgatggtcgacatcgcggcggcgctggcgctgcagtcgcgtgacggcgaa
gagttcctcatggcgccggagcccccggagccgccgcgatcgcgtcgcaccgagcgccgc
cccgccaagccggtgcgcacggcgggaaccggaatggcgacctatcgcatcgccgtcggc
aaacgacaccgagtcggtccgggcgcgatcgtcggtgctatcgccaacgaaggaggtttg
caccgcagcgatttcggccacatcacgatcgagcgcgacttctccctggtcgaattgccc
gcccggctgccacgcgcgacgctgaaggcgctcgaacacacccgcatctccggcgtactg
atcaacctgcggcccgaccgggcaacccgcaacggccgccgccgcgacggcgctaaacca
cgccgaaaaccagccggatga
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integrated database retrieval system
