Mycobacterium xenopi: MYXE_16230
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Entry
MYXE_16230 CDS
T06649
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mxe
Mycobacterium xenopi
Pathway
mxe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mxe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYXE_16230 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mxe03021
]
MYXE_16230 (rho)
03019 Messenger RNA biogenesis [BR:
mxe03019
]
MYXE_16230 (rho)
Transcription machinery [BR:
mxe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MYXE_16230 (rho)
Messenger RNA biogenesis [BR:
mxe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MYXE_16230 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
VWA_2
NACHT
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
BBU21834
UniProt:
A0AAD1M0C2
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All DBs
Position
1646145..1647974
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AA seq
609 aa
AA seq
DB search
MTDTDLITAGDSTNNDKLSSSVTSQTVLPTDSNTESAAPSEAGTAVSDGSLSAMVLPELR
ALANRAGVKGASGMRKNELIAAIRETQGQANGGQSDVAASPDSDHSANDAAGAQVEASAG
SAGAEASSRERRSAVREPGSPAATAVAEQGEVDQVDAVPAETAPPDTKPEQAEKPSEVGG
DQQGPDGQGRADEEGEGRQGRRGRRFRERRRRGERLGDGADAELREDDVVQPVAGILDVL
DNYAFVRTSGYLAGPHDVYVSMNMVRKNGLRRGDAITGAVRVPREGEQPNQRQKFNPLVR
LDSVNGGPVEDAKKRPDFGKLTPLYPNQRLRLETSTEKLTTRVIDLVMPIGKGQRALIVS
PPKAGKTTILKDIANAITKNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSD
HTTVAELAIERAKRLVEQRQDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPK
RFLGAARNIEEGGSLTVIATAMVETGSQGDTVIFEEFKGTGNAELKLDRKIAERRVFPAV
DVNPSGTRKDELLLSPDEFAIVHKLRRLLSGLDPHQAIDLLISQLRKTKNNYEFLVQVSK
TTPGSLDTD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggcgggcgacagcaccaacaacgacaagctgtcgagt
tccgtgacctcacaaactgttttgcccactgactccaacaccgaaagcgcggcgccatcc
gaagccgggactgcggtgtcggacggttcgctgtcagcgatggtgctgcccgagctgcgg
gcgctggccaatcgagctggcgtcaaaggcgcgtcgggcatgcgcaaaaacgaactgatc
gccgcgatccgagaaactcagggccaggctaacggcgggcaatccgacgtcgcagcttca
cctgacagcgatcacagcgcgaacgacgctgcgggcgcgcaggtcgaagcgtcggccgga
tcggccggtgccgaggcgtcgagccgggaacgacgcagcgccgtccgggagcccggatca
cccgctgcgacggcagtcgctgagcagggcgaagtcgaccaggtcgacgcggtacccgct
gaaaccgctccaccagacaccaagccggagcaagccgagaaacccagcgaagttggcggt
gatcagcaaggtcccgacgggcagggacgcgccgacgaggagggggaaggccggcagggc
cgccgaggacggcggttccgtgagcgcaggcgtcgtggtgaacgcctaggcgacggcgcc
gacgccgagctgcgggaagacgatgtcgttcagccggtggccggcattcttgacgttctc
gacaattacgcgtttgtgcgcacctccggttacctggccggcccgcacgacgtctacgtg
tcgatgaacatggtgcgaaagaacggcttgcgtcggggtgacgcgatcaccggtgccgtt
cgggtgcccagggagggcgagcagcccaaccagcgccagaagttcaatccgctggtgcgt
ctggacagcgtcaacggcgggccggtcgaggacgccaagaaacgtccggatttcggcaag
ctaacccccctgtaccccaaccagcggctccgcctggaaacctccaccgagaagctgacc
acccgggttatcgacctggtcatgccgatcggtaagggtcagcgcgcgctgatcgtctcg
cccccgaaggcgggtaagaccacgatcctcaaggacatcgccaacgcgatcaccaagaac
aatccggaatgccacttgatggtcgtcctggtcgacgagcggccggaagaggtcaccgat
atgcagcgctcggtcaagggcgaggtgatcgcctccaccttcgaccggccaccgtcagac
cacaccacagttgccgaacttgcgatcgagcgagccaagcggctcgtcgagcagcgccaa
gacgtcgtcgtgttgctcgactcgatcacccggttgggacgcgcctacaacaacgcctcg
ccggcgtcggggcgcattctgtccggtggtgtggactccacggcgctgtacccgccgaag
cggttcctcggggcggcccgcaacatcgaagaaggcggttcgctgacggtgatcgcgacg
gcgatggtggagaccggctcgcagggtgacaccgtgatcttcgaggagttcaagggcacc
ggcaacgccgaactcaaactggaccgcaagatcgctgaacggcgagtgttccccgcggtc
gacgtgaacccctccggtacccgcaaggacgagctgttgctctcgcccgacgagttcgcg
atcgtgcacaagctgcggcggctgctgtccggcctggacccgcatcaggcgatcgacttg
ctgatctcgcagctgcgcaagacgaagaacaactacgagttcctggtgcaggtgtccaag
acgactccgggcagtctcgacaccgactag
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