Mycobacterium xenopi: MYXE_17600
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Entry
MYXE_17600 CDS
T06649
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mxe
Mycobacterium xenopi
Pathway
mxe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mxe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MYXE_17600 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mxe03019
]
MYXE_17600 (orn)
03009 Ribosome biogenesis [BR:
mxe03009
]
MYXE_17600 (orn)
Messenger RNA biogenesis [BR:
mxe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYXE_17600 (orn)
Ribosome biogenesis [BR:
mxe03009
]
Eukaryotic type
Pre-60S particles
RNases
MYXE_17600 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF5401
Phage_Wedge1
Motif
Other DBs
NCBI-ProteinID:
BBU21970
UniProt:
A0AAD1M114
LinkDB
All DBs
Position
complement(1801665..1802321)
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AA seq
218 aa
AA seq
DB search
MSAVRDELVWIDCEMTGLDLRSDKLIEIAALVTDGELNILGEGIDVVIHADDAALSSMIE
VVTDMHARSGLVDEVRASTIDVATAETMVLDYIREHVKQPKTAPLAGNSVATDRGFIARD
MPALDSFLHYRMIDVSTIKELCRRWYPRIYYGQPTKGLTHRALADIHESIRELKFYRRTA
FVPPPGPSTSDIAAVAAELGAVTDAPKEIDSATERPSG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctgtgcgagacgaactggtgtggatcgactgcgagatgaccgggctcgacctg
cgctcggacaagctgatcgagatcgccgccctggtcaccgacggcgagctgaacattctc
ggcgaaggaatagacgtggtgatccacgccgacgacgccgcgttgtcgtcgatgatcgag
gtcgtcaccgacatgcacgcccgttcgggccttgtcgacgaggtacgggcgtcaacaatc
gacgtggccaccgccgaaaccatggtgctcgactacatccgcgagcacgtcaagcagccc
aaaaccgcgccgctcgccggcaattcggttgccaccgaccgcgggttcatcgcccgcgac
atgcctgccttggactcgtttctgcactaccggatgatcgacgtgagcacgatcaaagag
ctgtgccgacgctggtatccgcgcatctattacgggcagccgaccaaggggctgacccac
cgtgcgcttgccgacatccacgagtccatccgcgaactgaagttctaccgccggaccgcg
ttcgtgcccccgccggggccatctaccagcgacatcgctgccgtggccgccgaactgggg
gcagtgacggacgcgcccaaggaaatcgattcggccaccgagcgtccaagcggttaa
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