Mycobacterium xenopi: MYXE_28060
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Entry
MYXE_28060 CDS
T06649
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mxe
Mycobacterium xenopi
Pathway
mxe03030
DNA replication
mxe03430
Mismatch repair
mxe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYXE_28060 (dnaE)
03430 Mismatch repair
MYXE_28060 (dnaE)
03440 Homologous recombination
MYXE_28060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mxe03032
]
MYXE_28060 (dnaE)
03400 DNA repair and recombination proteins [BR:
mxe03400
]
MYXE_28060 (dnaE)
Enzymes [BR:
mxe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYXE_28060 (dnaE)
DNA replication proteins [BR:
mxe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYXE_28060 (dnaE)
DNA repair and recombination proteins [BR:
mxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYXE_28060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBU23016
UniProt:
A0AAD1M233
LinkDB
All DBs
Position
complement(2899103..2902633)
Genome browser
AA seq
1176 aa
AA seq
DB search
MTGSFVHLHNHTEYSMLDGAAKISPMLAEAQRLGMSAIGMTDHGNMFGASEFYNACTEAG
IKPIIGVEAYVAPGSRFDSRRVFWGDPAQKGDDVSGSGSYTHLTMIAENAAGLRNLFKLT
SLASFEGQLGKWSRMDAELIAEHAGGIIATTGCPSGEVQTRLRLGQDREALESAARWREI
FGPDNYFLELMDHGLTIERRVRDGLLEIGRKLGIAPLATNDCHYVTRDAAHNHEALLCVQ
TGKTLSDPTRFKFEGDGYYLKSAAEMRAIWDDAVPGACDTTLLIAERVGSYAEVWTPRNR
MPVFPVPDGHDQASWLRHEVEAGLARRFPDGIPPGYAERAAYEIEVICAKGFPSYFLIVA
DLVNYARSVNIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPERTSMPDIDID
FDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKAL
PPPIMAKDIPLSGITDPNHERYKEAAEVRGLIDTDPDVRTIYETARGLEGLIRNAGVHAC
AVIMSSEPLTDAIPLWKRPQDGAIITGWDYPACEEIGLLKMDFLGLRNLTIIGDAIENIK
ANRGIDVDLESVPLDDPATYALLGRGDTLGVFQLDGGPMRDLLRRMQPTGFEDVVAVIAL
YRPGPMGMNAHNDYADRKNGRQPITPIHPELAQPLQEILAETYGLIVYQEQIMRIAQKVA
GYSLAQADILRKAMGKKKADVLAAEYESFAAGMRANGFSSGAIKALWDTILPFADYAFNK
SHAAGYAMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVNE
SGLNFASVGTDIRYGLGAVRNVGANVVASLLKTRTEKGKFTDFSDYLNKIDIAACNKKVT
ESLIKAGAFDSLGHPRKGLFLVHTDAVDAVLGTKKAEAMGQFDLFGGTDTATDAVFSVKV
PDEEWDDKHKLALEREMLGLYVSGHPLNGVAHLLATQVDTAIPAILDGDVPNEAPVRVGG
ILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVVINARVKVQD
DRICLVANDLVVPDFSNVQPVRPLEVSLPTRQCTADKVNALKQVLARHPGTSQVHLRLLS
GDRVTTLELDSSLRVTPSPALMGDLKALLGPGCLGA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgactggctccttcgtgcacctgcataaccacaccgagtactcgatgctggacggtgcc
gcgaagatcagcccgatgctggccgaggcgcagcgcctgggcatgtcggccatcgggatg
accgaccacggaaacatgttcggcgccagcgagttctacaacgcatgcaccgaagccggg
atcaagccgatcatcggggtcgaggcctatgtcgcgcccggctcacggttcgactcgcgg
cgggtgttctggggcgatccggcgcagaagggcgacgacgtctcaggcagcgggtcctac
acccacctgaccatgatcgccgaaaacgccgccgggctgcgcaacctgttcaagctgacg
tcgctggcgtcgttcgagggccagttgggcaaatggtcgcggatggacgccgagctgatc
gccgagcacgccggcggcatcatcgccaccaccggctgcccctccggtgaggtgcagacc
cggctgcggctcggccaggaccgggaggcgctggagtcggccgcccggtggcgggagatc
ttcggcccggacaactatttcctggagctgatggaccacgggctgaccatcgagcgacgg
gtccgcgacgggctgctcgagatcggccgcaagctcggtatcgcgccgctggccaccaac
gactgccactacgtcactcgcgacgccgcgcacaaccacgaggcgctgctgtgcgtgcag
accggcaaaaccctgtcggatccgactcggttcaagttcgaaggcgacggctattacctg
aagtcggccgccgagatgcgggcgatctgggacgacgccgtgcccggggcctgcgacacc
acgctgctgatcgccgagcgggtgggctcgtatgccgaggtgtggacaccgcgcaaccgg
atgccggttttcccggtgcccgacggacacgaccaggcgtcgtggctgcgtcacgaggtc
gaggccgggctggctcgccggttcccggacgggataccgcccggatatgccgagcgggcc
gcctacgagatcgaagtcatctgcgccaagggctttccgtcctacttcctgatcgtggcc
gacctggtcaactacgcccgttcggtgaacatccgggtcgggccgggccgcggctcggcg
gccggttcgctggtcgcgtacgcgttgggcatcaccgacatcgacccgatcccgcacgga
ctgctgttcgagcggttcctcaaccccgagcgcacgtcgatgcccgacatcgacatcgac
ttcgacgatcgccgccgcggcgagatggttcgatacgccgccgacaagtggggccatgac
cgggtcgcccaggtgatcacattcggcaccatcaaaaccaaagcagcgctgaaggattcg
gcgcgaatccactacggccagccaggtttcgcgatcgccgaccggatcaccaaggccctg
ccgccgccgatcatggccaaagatattccgctgtcgggaatcaccgatcccaaccacgag
cggtacaaggaagccgccgaggtgcgggggttgatcgacaccgaccccgacgtgcgcacc
atctacgagaccgcccgcgggctggaaggtctgatccgcaacgcgggggtgcacgcctgc
gcggtgatcatgagcagcgaaccgctcaccgacgccatcccgctgtggaagcgcccccag
gacggcgcgatcatcaccggctgggactatccggcgtgcgaggaaatcgggctgctgaaa
atggatttcctcggcctgcgcaacctgacgatcatcggcgacgcgatcgagaacatcaag
gccaacaggggaatcgacgtcgacctggaatctgtgccgctcgacgacccggccacctac
gcgctgctgggccgcggcgacacgctcggtgtcttccaactcgacggcggccccatgcgg
gacctgctgcggcgcatgcagcccaccggcttcgaagacgtcgtcgcggtgatcgcgctg
tatcggcccgggcccatgggcatgaacgcccacaacgactacgccgaccgcaagaacggc
cgccagcccatcacaccgatccaccccgaactcgcccagccgttgcaggagatcctggcc
gagacgtacggcttgatcgtctaccaagagcagatcatgcggatcgcgcagaaggttgcg
ggctattcgctggcccaagccgacattctgcgaaaagccatgggcaagaagaaagctgac
gttctggccgccgaatacgaaagcttcgcggcgggcatgcgtgccaacggattctcgagc
ggggcgatcaaggcgctgtgggacaccatcttgccgttcgccgactacgcgttcaacaag
tcgcatgccgccggatatgcgatggtgtcttattggaccgcctacttgaaggccaactac
ccggccgaatacatggccgggctcttgacctcggttggcgacgacaaggacaaagccgcg
gtctacctggccgattgccgcaagctgggcatcacggtgctgccgcccgacgtcaacgag
tcgggtttgaacttcgcgtcggtgggcaccgacatccgctacgggctcggcgcagtgcgc
aacgtcggtgcgaatgttgttgcctcgctgctcaagacccgcaccgagaagggtaagttc
accgacttctccgactacttgaacaagatcgacatcgcggcgtgcaacaagaaggtcacc
gaatcgctgatcaaagccggcgcgttcgattcgctgggccacccccgtaagggcttgttc
ctggtgcacacggatgctgtcgacgcggtactgggcaccaagaaggccgaggcgatgggc
cagttcgacctgttcggcggcaccgacacggccaccgacgcggtgttcagcgtcaaagtg
cccgacgaggagtgggacgacaagcacaagctggcgttggagcgcgaaatgctggggcta
tacgtgtccgggcatccgctcaacggggtggcgcatctgctggccacccaggtggacacc
gccatcccggcgatcctcgacggcgacgtccccaacgaagctccggtgcgggtcggcggc
atcctggcatcggtgaaccgccgggtgaacaagaacggaatgccttgggcatcagcgcaa
ctagaagacctcaccggtggcatcgaggtgatgttcttcccgcacacctactccagctat
ggtgccgacatcgtcgacgatgccgtggtggtgatcaacgctcgagtgaaagtccaagac
gatcggatctgcttggtcgccaacgaccttgtggtgccggacttttcgaatgtgcagccg
gtgcggccactggaagtgagcctccccacccgccaatgcacagccgacaaggtcaatgcg
ctcaagcaagtcctggcccggcatcccgggacttcgcaggtgcatctgcggctgcttagc
ggagaccgggtcacgacgttggagctggactcctcgcttcgggtgacaccgtccccggcg
ttgatgggtgaccttaaggcgctgctcggcccagggtgcttgggcgcctaa
DBGET
integrated database retrieval system
