Moritella yayanosii: MORIYA_0289
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Entry
MORIYA_0289 CDS
T05564
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mya
Moritella yayanosii
Brite
KEGG Orthology (KO) [BR:
mya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mya03016
]
MORIYA_0289 (rnb)
Enzymes [BR:
mya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MORIYA_0289 (rnb)
Transfer RNA biogenesis [BR:
mya03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MORIYA_0289 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Peptidase_M16_C
DUF7716
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
SQD76767
UniProt:
A0A330LHX1
LinkDB
All DBs
Position
MORIYA:complement(299001..300944)
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AA seq
647 aa
AA seq
DB search
MFRDNPLLSQLKQNMRQNTPSVEGTVKGTERGFGFLEADDGESYFIAPPHMKKIMHGDRI
KAYIETNGDKTSAEPDTLVEAKLTRFIARISMTKNKLTVLADSPVINMPIRAKLVGLGKQ
KVNDGDWVVAQLKSHALKDGSFAAEVTGFVATATDPNAPWWVTLARQNLAKDVPAMPDSV
EFKDDTTRIDLTDKPFFTIDSASTQDMDDALFVEKTAEGNLKVTVAIADPTSYIPADSEL
NKIAAERAFTVYLPGRNIPMMPRELSDSVCSLVAGEKRPTLCCTYTINEDGALAEEFKFF
TAWITSQHKLSYTQVSNWIEEESTEWQPEAQLAEQLQSLATFARHRQQWRKNNAIVFPDQ
PDYSFELDDSGNVLAIHVEHRRIANQMIEETMVAANITAARLFRQNGDVGVFNTHAGFDP
EKIDLVVELLTEHGIECTKEHIQSLPGYVELQRTLAEKANPALDSRLRRMQSYSIISASA
ERHFAMGLDGYATWTSPIRKYGDIINHRLIKATLTNGSAPSATEDEVILMSERRRQHRMA
ERDISSWLYVDYLTPAVESKQVFEASIMDVNRGGLRVRLLENGAVAFIPASLLHDNKKEV
KCLVETGQISIKDQVEYSLGDVIYVNIAEINKEKRNIVAKPVEKIAS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcgacaatccactactatctcaactaaaacaaaatatgcgccaaaacacgccg
agtgtagaaggcacagttaaaggcactgaacgtggttttggcttccttgaagcggatgat
ggcgaaagctatttcattgccccgcctcacatgaaaaaaatcatgcatggcgatagaatt
aaagcatatatcgaaactaacggcgataaaacatctgcagaaccagataccttagttgaa
gctaagctaacgcgttttattgcccgtattagtatgactaaaaacaagctcactgtgctt
gcagacagtcctgtaatcaacatgccaattagagctaagttagttggtttgggcaagcaa
aaagttaacgacggtgactgggttgtagcacaactaaaatctcacgcattaaaagatggt
agctttgccgctgaagtaacggggttcgttgcaacagcaacagatccaaatgcaccatgg
tgggtaacactagcacgccaaaatctagctaaagatgttccagcaatgcctgattctgtt
gaatttaaagatgatacaacccgtattgatctaacagataagccattctttactatcgat
tcagcgtcaacacaagatatggacgatgcactgtttgttgagaaaacagcagaaggcaat
cttaaagtaacggtagcgatcgccgatccaacatcatatatccctgccgattcagaatta
aataaaattgcagcagagcgcgcatttaccgtatatctaccgggtcgtaacatcccgatg
atgccacgtgaattaagtgatagcgtttgttcattagttgctggcgaaaaacgcccgacg
ttatgctgtacttataccatcaatgaagatggtgcattagcagaagaatttaaattcttc
accgcatggatcacgtcacagcacaaactgtcttacacccaagtatctaattggattgaa
gaagaatcaactgaatggcaacctgaagcacaactggcagaacagctacagtcattggct
acgtttgctcgtcatcgtcaacaatggcgtaaaaacaatgccatcgtgttccctgaccaa
ccagattacagctttgagctagacgacagcggtaatgtactggctattcacgtagagcac
cgtcgtattgccaatcaaatgatcgaagaaacgatggttgcagcgaacattacagcggca
cgtttattccgtcaaaatggtgatgttggtgtatttaatacccacgcaggtttcgatcca
gagaaaattgatttggttgtcgaattattgactgagcatggcattgaatgtaccaaagag
cacatccaatcattaccaggttatgttgaattacaacgtacgttagctgaaaaagccaat
ccagctttagacagtcgtttacgtcgcatgcaaagctatagcatcatcagtgccagtgca
gaacgccacttcgcgatgggcttagacggttatgcaacatggacgtcacctattcgtaaa
tatggtgacatcattaaccaccgtctaatcaaagcaacattgaccaatggttctgcacct
tctgcaactgaagatgaagtgatcttaatgtcagaacgtcgtcgtcaacacagaatggct
gaacgtgatatctcatcgtggttatacgttgactacctaacacctgcagtagagagcaaa
caagtattcgaagcaagtattatggatgtgaaccgtggtggtttacgtgtgcgtttactt
gaaaatggcgcggttgcatttatccctgctagcttattacatgataataagaaagaagtt
aaatgcttagttgaaactggccaaatcagtattaaagatcaagttgaatacagcctaggt
gacgtgatttacgttaacattgctgaaatcaacaaagaaaaacgtaacattgttgctaaa
ccagttgaaaaaatagcgagttaa
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