KEGG   Moritella yayanosii: MORIYA_3038
Entry
MORIYA_3038       CDS       T05564                                 
Symbol
rho
Name
(GenBank) transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
mya  Moritella yayanosii
Pathway
mya03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mya00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MORIYA_3038 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mya03021]
    MORIYA_3038 (rho)
   03019 Messenger RNA biogenesis [BR:mya03019]
    MORIYA_3038 (rho)
Transcription machinery [BR:mya03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MORIYA_3038 (rho)
Messenger RNA biogenesis [BR:mya03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MORIYA_3038 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_25 AAA_22 S1CSD-TOTE-2 AAA Mor
Other DBs
NCBI-ProteinID: SQD79494
UniProt: A0A330LR90
LinkDB
Position
MORIYA:3097241..3098506
AA seq 421 aa
MNLTELKNTPVSELVKLGESMGLENLARLRKQDIIFSILKVHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVGGKIRPPKDGERYFALLKIDQVN
YDRPENSRNKILFENLTPIHPIERFRLERGNGSTEDITARILDLSAPIGKGQRGLIVAPP
KAGKTMLLQNIASSIALNYPDAILMVLLIDERPEEVTEMRRLVRGEVIASTFDEPASRHV
QVAEMMIEKAKRLVEHKKDVIILLDSITRLARAYNTVTPSSGKILSGGIDANALHRPKRF
FGAARKVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNQELHLNRKIAERRIYPAIDF
TRSGTRREELLADKNELQKMWILRKIIHPMGEIDAMEFLIDKLAMTKTNEQFFEAMKKQK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatttaaccgaattaaaaaacacaccagtttctgaacttgtaaaactgggcgaatct
atgggtctagaaaatctggctcgcttaagaaaacaagatatcatcttctcgatcctaaaa
gttcacgcgaaaagcggcgaggacatttttggtgatggtgttttagagatcttgcaggat
ggctttgggttcttgcgctcagcagacagctcatatctcgccggacctgatgatatttat
gtatcaccaagtcagatacgtcgctttaacttgcgaacgggtgataccgttggcggtaaa
attagaccgccaaaagatggcgaacgctattttgcgctgttaaaaattgaccaagttaac
tatgaccgtccagaaaactctcgtaataaaatcctctttgaaaacctaacgccaatccac
ccgattgaacgttttcgtttagaacgtggtaatggcagtaccgaagatattaccgcacgt
attcttgatttaagtgcgccgatcggtaaaggtcaacgtggtttaattgtggcaccgccg
aaagccggtaaaaccatgttattacaaaatattgcctcttcaattgcgttaaattatcca
gatgcgatattgatggttctacttatcgatgaacgtccggaagaagtaacagagatgcgc
cgtttggtgcgtggagaagttattgcttctacttttgatgagcccgcgagccgtcatgta
caagtagcagaaatgatgattgaaaaagccaagcgtcttgtagaacacaagaaagacgtg
atcatcttactggattctatcacccgtctggcccgtgcttacaatacggtaacaccatca
tctggtaagatcttatctggtggtattgatgccaatgcattacaccgtccaaaacgtttc
tttggtgctgcacgtaaagttgaagaaggtggttctttaactattatcgcaacagcattg
attgatactggttcgaaaatggacgaggtcatttacgaagaatttaaaggtacaggtaac
caagagttacaccttaatcgtaaaattgcagagcgtcgtatttatcctgcgattgatttc
acgcgttcaggtacccgtcgtgaagagctattagcagataaaaatgagctacaaaaaatg
tggatcctacgtaagattattcatccaatgggtgagatcgatgcgatggaattcctgatt
gataagctggccatgacgaaaacgaatgagcaattcttcgaagcaatgaagaagcaaaaa
tcataa

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