Moritella yayanosii: MORIYA_3633
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Entry
MORIYA_3633 CDS
T05564
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mya
Moritella yayanosii
Pathway
mya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MORIYA_3633 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mya03019
]
MORIYA_3633 (deaD)
03009 Ribosome biogenesis [BR:
mya03009
]
MORIYA_3633 (deaD)
Enzymes [BR:
mya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MORIYA_3633 (deaD)
Messenger RNA biogenesis [BR:
mya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MORIYA_3633 (deaD)
Ribosome biogenesis [BR:
mya03009
]
Prokaryotic type
rRNA helicases
MORIYA_3633 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
UTP25_NTPase-like
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
SQD80085
UniProt:
A0A330M107
LinkDB
All DBs
Position
MORIYA:3728551..3730392
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AA seq
613 aa
AA seq
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MSDTSPIVQFTDLNLPEPILRVLNDLGYEAPTPIQAECIPLLQNGGDVLGMAQTGTGKTA
AFALPLLSNIDTALTKPQILVLAPTRELAIQVAEAFQTYSRHMRGFHVLPIYGGQSYPIQ
LKALKRNPQVIVGTPGRVIDHINRGTLDLSGIKAIVLDEADEMLRMGFIDDVESILSKTP
AERQMALFSATMPEEIRRITKRFMTNPTSVQIATKTSTVENIEQKCLIIGGLQAKLDGLT
RILETEDYDGVIIFARTKTMTVELAEKLEARGYSAAALNGDLNQAMRERTISRLKSGQLD
ILIATDVAARGLDVPRIDLVINYDIPTDTESYVHRIGRTGRAGRKGTAILFAAPRERRLL
KAIERATRQPLIMMDLPSRDDVTKKRISSFRDQLAALSTGDENLDFYRNLVGQLSEELEL
SELDLASALLFLAQKEKPLVLPPEAPRRERSFRDDDRGDRGRNDRGERRDRGDRPERGER
GERRPAAEMEVFRIEVGRNDGVQVKNIVGAIANEANINSRNIGGIRLHDDYSTIELPKGM
PSEQLQQLQQVYVCNKALRMSKLEGVAAEGRQERSRPPRDNDRPARDGHRGQRRDSSERR
DNSERRPRRPNRD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacatcacccatagtacaatttactgatttaaatttacctgaaccaatttta
cgagtgttgaatgatctaggttatgaagcacctacaccaattcaagctgaatgtattccg
ttactacagaacggtggtgatgtgctaggtatggcacagactggtacgggcaaaactgct
gcgtttgcattaccattattgagtaacattgatactgcattgactaaaccacagatattg
gtgctagcaccaactcgtgagttagcgatccaagttgctgaagcattccaaacatactca
cgtcatatgcgtggattccatgtgttacctatctacggtggtcaaagctacccgattcag
ctaaaagcacttaaacgcaacccacaagtgattgttggtacgcctggccgtgtgattgat
cacattaaccgtggtacgcttgatctttctggtattaaagcgatagtacttgatgaagct
gatgaaatgctacgcatgggctttattgatgatgtagaatcaattctgtctaaaacacct
gcagaacgtcaaatggcgttattctctgcaactatgcctgaagaaattcgtcgtattacc
aaacgttttatgactaacccaacttcggttcaaattgcaactaaaacatcaactgttgaa
aacattgaacaaaaatgtttaatcattggtggtttacaagcaaaacttgacggtctaaca
cgtattcttgaaactgaagattacgatggcgtgatcatctttgctcgtactaaaacaatg
actgttgaacttgctgagaaattagaagcgcgcggttattctgctgctgcactaaacggt
gacttaaaccaagcaatgcgtgagcgcactataagtcgtctgaaaagtggccagttagat
attcttatcgcaactgacgttgcggcacgtggtcttgacgttcctcgtattgacctcgta
attaactacgatatcccaactgatacagaatcatacgttcaccgtattggtcgtacaggc
cgtgctggacgtaaaggtactgcaatcttatttgcagcaccacgcgaacgtcgtttatta
aaagcgattgaacgtgcaacgcgtcagccattaattatgatggatctaccttcacgtgat
gatgtaacgaaaaaacgtatttcatcattccgtgatcagttagcggcactttctactggt
gacgaaaacttagatttctacagaaacttagttggtcaactttctgaagagttagaacta
agcgaattagatcttgcatctgcgttattattcctagcacagaaagaaaaaccattagta
ttaccaccagaagcgccacgtcgtgaacgtagcttccgtgatgatgaccgtggtgatcgt
ggccgtaacgaccgtggcgaacgccgtgatcgtggtgaccgtcctgaacgtggcgaacgt
ggcgaacgtcgtccagctgcagaaatggaagttttccgtattgaagttggtcgtaatgat
ggtgttcaagttaagaatatcgttggcgctattgctaatgaagcgaatatcaacagccgt
aacatcggcggtatccgtttacatgatgactactcaacaattgaattaccaaaaggtatg
ccaagcgagcagttacaacaactacaacaagtttatgtttgtaacaaagcattacgcatg
agcaaacttgaaggtgttgcagctgaaggtcgtcaagaacgtagccgtccaccacgtgat
aacgatcgtccagcacgtgatggtcatcgtggtcaacgtcgtgattctagcgaacgtcgt
gacaacagcgaacgtcgtccacgtcgtcccaatcgtgactaa
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