Myotis brandtii (Brandt's bat): 102241558
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Entry
102241558 CDS
T02920
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase-like
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102241558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myb03041
]
102241558
Enzymes [BR:
myb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102241558
Spliceosome [BR:
myb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102241558
Complex C
U5 SnRNP specific factors
102241558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
102241558
NCBI-ProteinID:
XP_014399305
LinkDB
All DBs
Position
Un
AA seq
2088 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTCRDKTTGEVLSLVGKLEGTRMGDKAQRTR
PQMQEERRAKRRKRDEDRHAINKMKGYTLLSEGIDEMVGIIYKPKTKNTREIYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDREIQNMDDNVDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELKGSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDLINVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIRVLDLEDLVFTQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKP
FGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRATLETDENLLLCAPTGAGKTNVAL
MCMLREIGKHINPDGTINVDNFKIIYIAPMRSLVQEMVGSFGKRHRAGGLARHCFLYQGV
SAVPRMAFPLQRWYLTQVQSVSEPRMSLTYSGLYKGVSSFCHPLHSSXSPVLLGAVGVAL
WPLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIV
YEKIMGHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQ
CKNLELKDLLPHGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVII
KGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLP
IESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPL
LDQRRLDLVHTAASMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPT
LSEAELFRVFSLSSEFKNITVREEEKLELQKLLERVPIPVKESTEEPSAKINVLLQAFIS
QLKLEGSALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWRSMCP
LRQFRKLPEEAVKKIEKKEFPFERLYDLKDVEIGELIRMPKMGKTIHKYVHLFPKLELSV
HLQPITRSTLKVELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQD
EHLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRYLILPEKYPPPTELLDLQPLP
VSALRNSTFESLYQGKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRML
LQSSEGRCVYITPVEALAEQVYRDWYKKFQDRLSKKVVLLTGKTSTDLKLLGKGNIIIST
PEKWDILSWRWKQRKNVQNISLFVVDEVHLIGGENGPVLEAICSRMRYISSQTERPIRIV
ALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYH
AITKHSPKKPVIVFVPSRKQTRLTAVDVLSTCAADIQRQRFLHCTEKDLIPYLEKLSDNT
LRETLLNGVGYLHEGLSPVERRLVEQLFSSGAIQVVVASRSLCWGMSVAAHLVIIMDTQY
YHGKIHAYVDYPIYDVLQMVGRANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHL
DHCMHDHFNAEIVTKTMENKQDAVDYLTWTFLYRRLTQNTNYYNLQGISHRHLSDHLSEL
VEQTLSDLEQSECISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEI
ISNAAEYEDIPIRHCEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAEL
QSDTEEILSEAIRLIQACVDVLASNGWLSPALAAMELAQMVTQAMWPKDPYLKQLPHFTS
EHIQRCTDKGVESVFDIMELEDEERNALLRLSDGQMADVARFCNRYPNIELSYEVVDKDG
IRSGGPVVVLVQLEREEEVTGPVMAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKA
KVKLDFVAPATGAHSYTLYFMSDAYMGCDQEYTFRVDVKEAETDSDSD
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgaccgcccggagcctgcagtacgagtacaaggcgaactcgaatcttgtc
ctccaagctgaccgttctctcattgaccggacctgccgggataaaaccacaggagaggtg
ctatccctggttgggaagctggagggcacccggatgggagataaggctcaacggaccaga
ccacagatgcaggaggaaagaagagccaagcgaagaaagcgtgacgaggaccgtcacgcc
atcaacaagatgaaggggtacactctgctctcggagggcatcgatgagatggtgggcatc
atctataagcccaaaaccaaaaacacccgggagatttacgaagtgctgctcagcttcatc
caggctgcccttggggaccagccccgtgatattctttgtggggcagctgatgaagttcta
gctgtcctaaagaatgaaaagcttcgtgacaaggaaaggagaaaggagattgatctgttg
ctggggcagacagatgatacccgataccatgtgctggtgaacttgggcaagaagatcaca
gactatggtggagacagggaaatccagaatatggatgacaacgttgatgagacctatggt
gtgaatgtccagtttgagtctgatgaggaggaaggcgatgaagatgtttatggggaggtt
cgagaagaggcgtccgatgatgacatggaaggggatgaggctgtggtgcgctgcaccctc
tcagctaatcttgtagcctctggtgaactgaagggttctaagaagaaggatttgcaccct
cgggacatcgatgcgttttggctgcagcggcagctcagtcgcttctatgatgatgccatt
gtatcgcagaagaaggcagacgaagtgttggaaatcttaaagacggccagtgatgaccgg
gagtgtgagaaccagctggtgctcctgctcggtttcaatactttcgatttaattaatgtg
ctgcggcagcacaggatgatgattttatactgcaccttgctggccagtgcacagagtgaa
gctgaaaaggaaaggatcatgggaaagatggaagctgatccagagttatctaagttcctc
taccaacttcacgagacggagaaggaggatctgatccgggttctggacttggaggacctg
gtttttacgcaagggagtcacttcatggccaacaaacgctgtcagcttccggatggatcc
tttcggcgccagcgtaaaggctacgaagaggtgcacgtgcctgctctgaagcccaagccc
ttcggctctgaggaacaactgcttccagtggagaagctgcccaaatacgcccaggctgga
ttcgagggcttcaagacgctgaaccggatccagagtaagctctaccgggccaccctggag
acagacgagaacctgctactgtgcgcccccactggtgccgggaagaccaacgtggccctg
atgtgcatgctccgcgagatcgggaagcacattaaccccgacggcactatcaacgtggac
aacttcaagatcatctacatcgccccgatgcgctccctggtgcaggagatggtgggcagc
tttgggaagcgtcacagggcagggggcctggctcgtcactgcttcctgtatcaaggcgtc
tctgcagtgcctcggatggcgtttccacttcaaaggtggtacttgacccaagtacagagt
gtttctgaaccaagaatgtccttgacctattctggcctttacaagggtgtgtcgtctttc
tgtcaccctctgcatagcagtnattctccagttctcctgggcgctgttggagtagctctg
tggcccttgagcgccaccctccccaactacgaagatgtggccacatttctgcgtgttgat
cctgccaagggcctcttctacttcgacaatagcttccgcccagtgcctctggaacagacc
tacgtaggcatcacagagaaaaaagctatcaagcgtttccagatcatgaatgaaatagtc
tacgagaagatcatgggacatgcggggaaaaatcaggtgctggtgtttgtccactcccgg
aaggagactgggaagacggccagggccattcgggacatgtgcctggagaaggacactctg
ggtctgtttctgagagagggctccgcctccacagaagtccttcggacggaggcagagcag
tgcaagaacctggagctgaaggatctgctgccccatggctttgctattcatcatgcgggc
atgaccagagtggacaggacactcgtagaggacctttttgctgataaacacattcaggtt
ttagtttccacagcaactctggcttggggtgtgaatctccccgcacatacagtcatcatc
aaaggcacccaggtgtatagtccagagaaggggcgctggacagagttgggagcactggac
attctgcagatgctgggacgagccggaagaccccagtatgacaccaagggcgaaggcatc
ctcatcacatcgcatggggagcttcagtactacctgtccctcctcaaccagcagcttcct
attgagagccagatggtgtcaaagctgcctgacatgctcaacgcggaaatcgtgctggga
aatgtccagaatgcaaaggatgcagtgaactggctgggctatgcctacctgtatatccga
atgctccggtccccaaccctctacggcatctctcatgacgacctcaagggagaccccctg
ctggaccagcgccggctggacctggtgcatactgctgcctcgatgctggataagaacaac
ctggtcaagtatgataagaagacaggcaacttccaggtgacagaactgggccgtatagcc
agccactactacatcaccaacgacaccgtgcagacctacaaccagctgctgaagcccact
ctgagcgaggctgagctcttcagagtcttctcgttgtcctcagagttcaagaacatcact
gtgagagaggaggagaagctggaactgcagaagctgttggagagggtgcccattcccgta
aaggagagcactgaggagcccagtgcgaagatcaacgtgctcctccaagccttcatctca
cagctgaaactggagggctcggcactgatggctgacatggtgtacgtcacacagtcggcg
ggccggttgatgcgggccatctttgaaattgtcctgaaccgcggttgggcacagcttaca
gacaagaccctgaatctctgcaagatgatcgataaacgcatgtggcggtccatgtgtccg
ctgcgtcagttccgcaaactccctgaggaagcagtgaagaagattgagaagaaagaattc
ccctttgagcgtctgtatgacctgaaagacgttgagataggggagctcatccgcatgccg
aagatgggcaagaccatccacaaatacgtccacctgttccccaagttggagctgtcggtg
cacctgcaacccatcacgcgctccaccctgaaggtggagctgaccatcacgccagacttc
cagtgggatgaaaaggtccatggttcgtccgaggcattctggattctggtggaggatgtg
gacagtgaggtgatactgcaccatgagtattttctactcaaggccaagtatgcccaggat
gagcacctcattacgttctttgtgcctgtctttgaaccactgccccctcagtacttcatc
cgagtggtgtctgaccgctggctctcttgtgagacccagcttccggtctctttccgatac
ctgatcctgccagagaagtacccacctcccactgaacttctggacctgcagcccttgccc
gtgtctgccttgagaaacagcaccttcgagagcctttaccaaggtaaatttcctttcttc
aaccccatccagacccaagtgtttaacacagtgtacaacagtgatgacaacgtgtttgtg
ggagcacccaccggcagcgggaagaccatctgtgcggagttcgccatcctgcgcatgctg
ctgcagagctcggaggggcgctgtgtctacatcacccccgtggaggcgctggcagagcag
gtgtacagggactggtacaagaagttccaggaccggctcagcaagaaggtggtgcttctg
acgggcaagaccagcacagacctcaagcttctgggcaaaggcaacatcatcatcagtacc
cctgagaagtgggacatcctctcttggcgctggaagcagcgcaagaacgtccagaacatc
agcctcttcgtggtggatgaggtccacctcatcgggggcgagaatgggcctgttttggaa
gcgatctgctcccggatgcgctatatctcctcccagaccgagcggcccattcgcattgtg
gcactcagctcctcgctctcaaacgctaaggatgtggcccactggctggggtgcagtgcc
acgtccactttcaacttccacccgaatgtgcgccctgtgcccttggagctgcacatccag
ggctttaacatcagccacacacagactcgcctgctgtccatggccaagcccgtgtaccat
gcaatcaccaagcactcgcccaagaagcctgtcatcgtttttgtgccgtcccgcaagcag
acccgcctcactgcagtcgacgtcctcagcacgtgtgcagcggacatccagcggcagagg
ttcttgcactgcaccgagaaggacctgatcccatatctggagaagctgagcgacaacacg
ctcagggagacgctgttgaacggtgtgggctacctgcacgaggggctcagccccgtggag
cggcgcctggtggagcagctcttcagctcaggggccatccaggtggtggtcgcttctcgg
agtctctgctggggcatgagcgtggccgcccacctggtgatcatcatggacacccagtac
taccatggcaagattcacgcgtacgtggactaccccatctatgacgtgcttcagatggtg
gggcgtgccaaccgacctctgcaggatgacgaggggcgctgtgtcatcatgtgtcagggc
tccaaaaaggatttcttcaagaagttcttatacgagcccttgccagtggagtctcacctg
gaccattgcatgcatgaccacttcaacgctgagattgtcaccaagaccatggagaacaag
caggacgccgtggactacctcacctggacctttctgtaccgccgcctgacacagaacacc
aactactacaacctgcagggcatctcccaccgccacctgtctgaccacttgtcggagctg
gtggagcagaccctgagtgacctggagcagtccgagtgcatcagcatagaggacgagatg
gacgtggcacctctgaacctgggcatgatcgccgcctactattacatcaactacacaacc
atagagctcttcagcatgtccctaaatgccaagaccaaggtacgggggctcatcgagatc
atctccaatgcggccgagtacgaggacattcccatccggcactgtgaggacaacctcctg
cggcagttggctcagaaggtcccgcacaagctgaacaaccctaagtttaatgacccacat
gtcaagaccaacctgctcctgcaggctcacctgtcccgcatgcagctgagtgctgagctg
cagtcggataccgaggagatccttagcgaggcgatccggctcatccaggcctgtgtggac
gtcctcgccagcaatgggtggctcagtcctgctctggcagccatggaactggcccagatg
gtcacccaagccatgtggcccaaggacccatacctgaagcagctgccacacttcacctca
gagcacatccaacgctgcacagacaagggagtggagagtgttttcgacatcatggagctg
gaggatgaagagcgaaatgcgctgcttcggctgtctgacggccagatggcggacgtggcc
cgcttctgcaaccgctacccgaatatcgagctctcttacgaggtggtggataaggacggc
atccgcagtggcgggcccgtggtggtgctggtacagctggagcgagaggaggaggtcaca
ggtcccgtgatggcacctctcttcccacagaaacgtgaagagggctggtgggtggtgatc
ggagatgccaagtccaatagcctcatctccatcaagaggctgaccctgcagcagaaggcc
aaggtgaagcttgacttcgtggccccggccactggtgcccacagctacactctgtacttc
atgagtgacgcttacatgggatgtgaccaggaatacacattccgtgtggatgtgaaagaa
gctgagacagacagcgactcggattga
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integrated database retrieval system
