Myotis brandtii (Brandt's bat): 102242366
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Entry
102242366 CDS
T02920
Symbol
DICER1
Name
(RefSeq) dicer 1, ribonuclease III
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102242366 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
myb03036
]
102242366 (DICER1)
Chromosome and associated proteins [BR:
myb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102242366 (DICER1)
microRNA pathway
RISC loading complex
102242366 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102242366
NCBI-ProteinID:
XP_005871220
LinkDB
All DBs
Position
Un
AA seq
1921 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDRNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFSRHGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYAHLEVLASWTKEKWNQEFTKHQVLIMTCYVALIVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPYEIVVDCGPFMDRSGLYERLLMELEEALNFVNDCNISAHSKERDSTLISK
QILADCRAVLVVLGPWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLRFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD
IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSVLYRLHCLLTAEELRAQTASDAGV
GVRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAENDHYCKHSTIVPEHAAHQGASRT
SSLENHDQMSVTCRALLSESPGKLPIDVPTDLTAINGLSYNRNLANGSYDLANRDFCQGN
QLNYYKQEIPVQPTTSYPIQNLYNCENQPTPSDECTLLSNKYLDGNANKSTSDGSPAGAT
VPGPTEAVAVRKDRLGSAQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSSTDKWEKDELTKDCMLANGKLDDDFDEDEEEGLLWRAPKEDADDEDDF
LEYDQEHIQFIDNMLMGSGAFVKKIPLSPFSAADSAYEWKMPKKASLGSMPFSADFEDFD
YSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGIDTGKQSISYDLHTEQCIADKSIADC
VEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTEREKAMCPARENCSSQQRSLSGSRA
AASASASSRSAAGKDVEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEEKINYRFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFQVIDVFVQFQLEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPS
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcggaatacc
atagtctgtttgaacactggctcagggaagacgttcattgcagtgctactcactaaagag
ctgtcctatcagatcaggggagacttcagcagacatggaaaaaggactgtgttcttggtc
aactctgcaaaccaggttgctcagcaagtgtcggctgtcaggactcattcagacctcaag
gttggggaatacgcacacctagaagtacttgcatcttggactaaagagaaatggaaccag
gagtttactaagcaccaggttctcattatgacttgctatgtcgccttgattgttttgaaa
aatggttacttgtcactgtcagacattaaccttttggtgtttgatgaatgtcaccttgca
atcctagaccacccatatcgagaaattatgaagctctgtgaaagttgtccgtcatgccct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattagaa
gaaaagattcagaaactggagaaaattcttaagagtaatgctgagactgcaaccgacttg
gtggtcttagacagatacacttctcagccatacgagattgtggtggactgtggaccattt
atggacagaagtgggctttatgagagactgctgatggaattagaggaagcacttaatttt
gtcaatgactgtaatatatctgcacattcaaaagaaagagattctactttaatttctaaa
cagatactggcggactgtcgagcggtgttggtagttctggggccctggtgtgcagataaa
gtagctggaatgatggtgagagaactgcagaaacacatcaaacatgagcaagaggagctg
cacaggaaattcctgctgttcacagacactttcctgcggaaaatccatgccctgtgtgaa
gagcacttctcacctgcctcactggacctgagatttgtaactcctaaagtgatcaaactg
ctggagatcctccgcaagtacaaaccgtatgagcgacagcagtttgagagcgtggagtgg
tacaataacaggaaccaggataactatgtgtcttggagtgactctgaggatgatgatgag
gatgaagaaattgaagaaaaggagaagccagagacaaatttcccttctccattcaccaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgtcttaaacagattg
ataaaggaagctggcaaacaggacccagagctggcttacatcagcagcaacttcatcact
gggcacggcatcgggaagaaccagcctcgcaacaagcagatggaagcggaattcaggaag
caggaagaggtacttaggaaatttcgagcacatgagaccaacctgctaattgcaacaagt
attgtggaagagggtgttgatataccaaaatgcaacttggtggtccgttttgatttaccc
acagagtatcgatcctatgttcaatctaagggaagagcaagggcacccatctccaattat
atcatgttagcagatacagacaaaatcaaaagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttgagaaacaaatgctccaagtcagttgacactggggagactgac
atcgagcctgtggtggacgacgacgacgtgttcccgccgtatgtgctgaggcccgatgac
gggggtccacgcgtcacaatcaacacggccattgggcacatcaatagatactgcgctaga
ttaccaagtgacccgttcactcatctagctcctaaatgcagaacccgagagttacctgat
gggacattctattcaactctttacctgccaatcaactcacctcttcgagcctccattgtt
ggtcccccaatgagctgtatacgattggctgaaagagttgtagctcttatttgttgtgag
aaactgcacaaaattggtgaactggatgaccatttgatgccagttgggaaagaaactgtt
aaatatgaagaagagcttgatttgcatgatgaagaagagaccagtgtcccaggcagacca
ggttctacaaaacgaagacagtgctacccaaaagcaattccagaatgtctgagggatagc
tatcccaaacctgatcagccctgctacctgtatgtgataggaatggttctaacgaccccg
ttacctgatgaactcaacttcagaagacggaagctctatccccctgaggacaccacaaga
tgctttgggatactgacagccaaacccatacctcagattccgcactttccggtgtacact
cgctctggagaggtcaccatatccatcgagctgaagaagtctggcttcacgctgtctctc
cagatgctcgagttgattacaaggctccaccagtatatattctcacatattcttcgcctt
gaaaagcctgcactagaattcaagcccacagacgctgactcagcatactgtgttctacct
ctgaatgttgtgaatgactccagcactctggacattgactttaaattcatggaagatatt
gagaaatcagaagctcgcataggcatccccagtacaaagtactcaaaagaaacacccttt
gtttttaaattggaagattaccaggacgcagttatcatcccaaggtatagaaattttgat
caacctcatcggttttatgttgctgatgtgtacactgaccttaccccactgagcaaattt
ccttcccccgagtatgaaacttttgcagaatattataaaaccaagtacaaccttgacctg
accaatctcaaccagccactgctggatgtggaccacacatcctcgagacttaatctgttg
acacctcgccatttgaatcagaaagggaaagcccttcctctaagcagtgctgaaaagagg
aaagccaaatgggaaagtctgcagaataaacagatactggttcccgaactctgtgctatc
catccgatcccagcctcgctgtggcggaaagccgtctgtctccccagcgttctgtaccgc
cttcactgccttctgacggccgaggagctccgagcccagacagccagcgatgccggcgtg
ggagtcagatcccttcctgtggattttagataccctaacttagactttgggtggaaaaaa
tctatcgacagcaaatctttcatctcaattgctaactcctcttcagctgaaaatgatcat
tactgtaagcacagcacaattgtccctgaacatgctgcacatcaaggtgctagtagaacc
tcctctctagagaatcatgaccaaatgtctgtgacctgcagagcgttactcagtgagtca
cctgggaagctccccattgacgtgcccacagacctcacagcaattaacggtctttcttac
aatagaaatcttgccaatggcagttatgatttagctaacagagacttttgccaaggaaat
cagctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacaattgtgagaaccagcccacgcccagcgatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacaaatctacctcagatggcagtcccgcgggggccacg
gtgcctggtcccacagaagctgttgccgtgcgcaaggacaggctgggctctgcgcagagc
ccctctcctggctactcctccaggactctgggcccaaaccctggactcattcttcaggct
ttgaccctttcgaatgccagcgatgggttcaacctggagcggctcgagatgctgggggac
tccttcctaaagcacgccatcaccacgtatctattttgcacttaccctgatgcgcacgag
ggccgcctttcatacatgagaagcaaaaaggtcagcaactgcaatctgtatcggcttggg
aagaagaaggggctgcccagccgcatggtggtgtccatattcgacccccctgtgaactgg
cttcctcctggttatgtagtcaatcaagacaaaagcagcacagataaatgggagaaggat
gaactgacaaaggactgcatgttggctaatggcaaactggatgatgactttgacgaggac
gaggaggagggcctgctgtggagggcccccaaggaggacgccgacgacgaggacgacttc
ctggagtacgaccaggagcacatccagttcatagacaacatgctgatgggatcgggagct
tttgtgaagaaaatccctctctctcccttttcagccgccgactcagcatatgagtggaaa
atgcccaaaaaagcctccttaggtagcatgccattttcagcagacttcgaggactttgac
tatagctcttgggatgcaatgtgctatctggatcctagcaaagctgtggaggaggatgac
tttgtggtggggttctggaacccatcagaggaaaactgtggtattgacacagggaaacag
tccatttcttatgacctgcacacggagcagtgcattgctgacaaaagcatagctgactgc
gtggaagccctgctgggctgctatttaaccagctgtggcgagagggcggctcagcttttc
ctctgttcgctggggctgaaggtgctccctgtaattaaaaggactgagcgcgagaaggcc
atgtgccctgcccgggagaattgcagcagccaacaaaggagcctttcagggagccgggcg
gcggcctcggcctcggccagctcccgctccgccgcggggaaggacgtggagtacggctgc
ctgaagatcccgccccggtgcatgttcgaccatccggacgcggataagaccctgacgcac
ctcatatcgggttttgagaattttgaagagaaaatcaactacagattcaagaacaaggct
taccttctgcaggcgtttacccacgcctcctaccactacaacactattaccgattgttac
cagcgcctggaattcctgggagacgcgatcttggactacctcataaccaagcacctttac
gaagacccgcggcagcactccccgggcgtcctgacggacctgcgctccgccctggtcaac
aacaccatcttcgcgtccttggccgtgaagtacgactaccacaagtacttcaaagccgtg
tccccagagctcttccaggtcattgacgtctttgtgcagttccagctcgagaagaacgaa
atgcaggggatggattccgagctcaggcggtccgaggaggatgaggagaaggaggaggac
attgaagtccccaaggccatgggggatatttttgagtcacttgctggtgccatttacatg
gacagtgggatgtcgctggagatggtttggcaggtgtactatcctatgatgcggccactc
atagaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatggaa
ccagaaaccgccaagtttagcccggcggagaggacctacgatggcaaggtcagagtcacc
gtggaggtggtggggaaggggaagttcaaaggcgtgggtcgcagctacaggatcgccaag
tctgcagcggcaagaagagccctccgcagcctcaaagccaatcaacctcaggttcccagc
agctga
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integrated database retrieval system