KEGG   Myotis brandtii (Brandt's bat): 102246121
Entry
102246121         CDS       T02920                                 
Symbol
PBRM1
Name
(RefSeq) polybromo 1
  KO
K11757  protein polybromo-1
Organism
myb  Myotis brandtii (Brandt's bat)
Pathway
myb03082  ATP-dependent chromatin remodeling
myb05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:myb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102246121 (PBRM1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    102246121 (PBRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:myb03021]
    102246121 (PBRM1)
   03036 Chromosome and associated proteins [BR:myb03036]
    102246121 (PBRM1)
Transcription machinery [BR:myb03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102246121 (PBRM1)
Chromosome and associated proteins [BR:myb03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    102246121 (PBRM1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 DUF7877 HMG_WDHD1
Other DBs
NCBI-GeneID: 102246121
NCBI-ProteinID: XP_014395229
LinkDB
Position
Un
AA seq 1715 aa
MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
KDEHGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
NNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDEQDNQGTVTEGSSPS
YLKEILEQLLEAIVVATNPSGHLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG
SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKIVYFDAHTFLILDANSIKKIFYMKKAEIE
HEMTKSSLRMRTSSNLAAARLTGSAHSKGSLIEERNPTSKYYRNKRAVQGGRLSAITMAL
QYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFF
HLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAI
YKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTLDSEMLGLRRLSS
KKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHN
IRNDKYAGEEGMMEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDM
ASPKLKLSRKSGVSPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELP
DYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHK
VLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPSF
PNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIK
IRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDS
SGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPSEASLQPHIVCIERLWEDSAGEKWLY
GCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDE
DVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDEKNAD
NSEDSRTEDNFNLEKEKEDVPVEMANGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRP
RVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCA
VLSFKDFLSCRPTEIPENDVLLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKP
IVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELD
LMPYTPPQSTPKSAKGSAKKESSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVG
TEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMGVVPPPTPMG
MLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIP
PPGVMNQGVAPMVGTPAQGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMF
VAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLK
SKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENL
NT seq 5148 nt   +upstreamnt  +downstreamnt
atgggttccaaaagaagaagagcgacctccccttccagtagtgtcagcggggattttgat
gacgggcaccattctgtatctacaccaggcccaagcaggaaaaggaggagactttccaat
cttccaactgtagatcctattgctgtgtgccatgaactctacaataccatccgggactat
aaggatgaacatggcaggcttctctgtgagctcttcattagggcaccgaagcgaagaaat
caaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacagaaa
ctaaaaatggaggagtatgatgatgttaatctgctgactgctgacttccagctgcttttt
aacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaactc
tgggatttgtatcttcgaacaagaaatgagtttgttcagaaaggagaagcagatgatgaa
gatgatgatgaagatgagcaagacaatcaaggcacagtgactgaaggatcttctccaagt
tacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatccatca
ggacatctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagactat
tatgcaataattaaggaacctatagatctcaagaccattgcccagaggatacagaatgga
agctacaagagtattcatgcaatggccaaagatatagatcttctagcaaaaaatgccaaa
acttataatgaacctggttctcaagtattcaagatagtgtattttgatgcacatacattt
ttaattttggatgcaaattctattaaaaaaatattttatatgaaaaaggcagaaattgaa
catgaaatgactaagtcaagccttcgaatgaggacttcatcaaatttggctgcagccagg
ctgacaggttctgcacacagtaaaggcagccttattgaagagagaaatcccactagcaag
tattaccggaataaaagagcagtccaagggggtcgtttatcagcaattaccatggcactt
cagtatggctcagaaagtgaagaggatgctgctttggctgctgcacgttatgaagaagga
gagtcggaagcagagagcattacttcatttatggatgtttcaaatcctttttatcagctt
tatgacacagttaggagctgtcggaataaccaggggcagctaatagcggaaccttttttc
catttgccttcaaagaaaaaataccctgattattatcagcaaattaaaatgcccatatca
ctacaacagatcagaacaaagctaaagaaccaagaatatgaaactttggatcatttggag
tgtgatctgaatttaatgtttgaaaatgccaaacgctataatgttcccaattcagccata
tacaagcgagttctaaaattgcagcaagtcatgcaggcaaagaagaaggagcttgccagg
agagatgacattgaggatggagacagcatgatttcttcagccacctctgacactggtagt
gccaaaagaaaaaggaacactcttgacagtgagatgttgggtctcaggaggctatccagt
aaaaagaacataagaaagcagcgaatgaaaatcttattcaatgttgttcttgaagctcgt
gaaccaggttcaggcagaagactttgtgatctatttatggttaaaccatccaaaaaggac
tatcctgattattataaaatcattttggagccaatggacttgaaaataattgagcataac
atccgcaatgacaaatatgcaggggaagaggggatgatggaagacatgaagttgatgttc
cggaatgccagacactataatgaggagggctcccaggtgtacaacgatgcgcacatcctg
gaaaagttactcaaagataaaagaaaagagctgggaccactgcctgatgatgatgacatg
gcttctcccaaactcaagctgagtaggaagagtggtgtttctcctaaaaaatcaaaatac
atgacaccaatgcagcagaaactaaatgaagtatatgaagctgtaaagaactatactgat
aagaggggtcgccgcctcagtgccatatttctgagacttccctccagatctgagctgcct
gactactacctgaccattaaaaagccaatggacatggaaaaaattcgaagtcatatgatg
gccaacaaataccaagatatagactccatggttgaggactttgttatgatgtttaacaat
gcctgtacctacaatgagcctgagtctttgatctacaaagatgcccttgtcctacacaaa
gtcctgcttgaaactcggagagacctggagggagatgaggactctcatgttccaaatgtt
accttgctgattcaagagcttatccacaatctttttgtgtcagtcatgagtcaccaggat
gatgagggaagatgctacagtgactccttagcagaaattcctgctgtggatcccagcttt
ccaaacaaacctcctcttacttttgacataattaggaagaatgttgaaaataatcgctac
cggcggcttgatttatttcaagagcatatgtttgaagtattagaaagggcaagaaggatg
aatcggacagattctgaaatatatgaagatgcggtagagcttcagcagtttttcattaaa
attcgtgatgaactctgcaaaaatggagagattcttctttcaccggcactcagctatact
acaaaacatttgcataatgatgtggagaaagagaaaaaggaaaaattaccgaaagaaata
gaggaagataaactaaaacgagaagaagaaaaaagagaggctgaaaagagtgaagattcc
tcgggtgctgcaggcctctcaggtttacatcgcacttacagccaggactgcagctttaag
aatagcatgtaccatgttggagattatgtctacgtagagccctcggaagccagtctacaa
ccacatatagtctgtattgagagactgtgggaagattctgctggtgaaaaatggttgtat
ggctgttggttttatcggccaaatgaaacattccatctggctacacgaaaattcctagaa
aaagaagtttttaagagtgactattacaataaagttcccgttagtaaaattctaggaaaa
tgtgtggtcatgtttgtcaaggaatactttaaattatgcccagaaaactttcgagatgag
gatgtttttgtctgtgaatcacggtattctgccaaaaccaaatcttttaagaaaattaaa
ttgtggaccatgcccatcagttctgttaggtttgtccctcgggatgtgcccttgcctgtg
gtccgagtggcctctgtatttgcaaatgcagataaaggggatgatgaaaagaacgcagac
aactcagaagacagtcgaactgaagacaattttaacttggaaaaggaaaaagaagatgtc
cctgtggaaatggccaatggtgaaccaggttgccactactttgagcagctccgttacaat
gacatgtggctgaaggttggcgactgtgtcttcatcaagtcccatggcctggttcgccct
cgcgtgggccgaattgaaaaggtatgggttcgagacggagctgcatatttttatggtccc
atcttcattcacccagaagaaacggaacatgagcccacaaaaatgttctacaaaaaagaa
gtgtttctgagtaatctggaagaaacctgccccatgacatgtattctgggaaagtgtgct
gtgttgtcattcaaggacttcctctcctgcagaccaactgaaataccagaaaatgacgtt
ttgctttgtgagagccgctacaacgagagtgataagcaaatgaagaaattcaagggactg
aagaggttttcactctctgctaaagtggtagatgatgaaatttattacttcagaaaacca
attgttcctcagaaggagccttcacctttgttggaaaagaagatccagttactagaagct
aaatttgctgagttagaaggtggagatgatgatattgaagagatgggagaagaggatagt
gaggtcattgagcctccttctctgcctcaacttcagactcccttggccagtgagctggat
ctcatgccgtacacacccccacagtctaccccaaagtctgccaaaggcagtgcaaagaag
gaaagctccaaacggaaaatcaacatgagtggctacatcctgttcagcagtgagatgaga
gctgtgattaaggcccagcatccagactactcttttggggagctcagccgactggtgggg
acagaatggagaaaccttgagacagctaagaaagctgaatatgaagagcgggcagctaaa
gttgctgagcagcaggagagagagcgagcagcacagcaacagcagccgagtgcttctccc
cgagcaggcacccctgtgggggctctcatgggggtggtgccaccaccaacaccaatgggg
atgctcaatcagcagttgacacctgttgcaggcatgatgggtggctatccgccaggcctt
ccacctttgcagggcccagttgatggccttgttagcatgggcagcatgcagccacttcac
cctggggggcctccaccccaccatcttccgccaggtgtgcccggcctcccgggcatccca
ccaccgggtgtaatgaaccaaggggtggcccctatggtagggactccagcacaaggcgga
agtccatatggacagcaggtaggagttttggggcctccagggcagcaggcaccacctcca
tatcctggcccacatccagccggcccccctgttatacagcagccaacaacgcccatgttt
gtggctcctccaccgaagacccaacggcttctccactcagaggcctacctgaaatacatt
gaaggactcagtgctgagtccaacagcattagcaagtgggaccagactctggcagctcga
aggcgtgatgtccatttgtcaaaagaacaagagagccgcctaccctctcactggctgaaa
agtaaaggggctcacaccaccatggcagatgccctctggcgccttcgggatttgatgctc
cgagacaccctcaacattcgccaagcatacaatctagaaaacctttaa

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