Myotis brandtii (Brandt's bat): 102253187
Help
Entry
102253187 CDS
T02920
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102253187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myb03019
]
102253187
03041 Spliceosome [BR:
myb03041
]
102253187
Messenger RNA biogenesis [BR:
myb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102253187
Spliceosome [BR:
myb03041
]
Complex B
Other components
Prp19-related factors
102253187
Complex C
102253187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT_PRP39_N
TPR_2
TPR_8
TPR_12
ARM_TT21_C
TPR_15
TPR_19
Suf
ARM_TT21
RPN7
TPR_MalT
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
102253187
NCBI-ProteinID:
XP_014395253
LinkDB
All DBs
Position
Un
AA seq
485 aa
AA seq
DB search
QVKHRCVTDPDYEDVNNCHERAFVFMHKMPRLWLDYCQFLVDQGHITHTRCTFNRALQAL
PITQHSRIWPLYLRFLRSHPLPETAMRGYRRFLKLSPESAEEYIEYLKSSDWLDEAAQCL
ATVVNDEQFISKXGKSNYQLWRELCDLISQNPDKVQSLNVDTIIRGGLTRFTDQLGKLWC
SLADYYIRSGHFEKAPDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETTSELGRE
EEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHRVHEWHKRVALHQGRPREIINTYTE
AVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEKATKVSFKQVDDLASVWCECG
ELELRHENYDQALRLLRKATALPTRRAEYFDGLEPVQNHAYKSLKVWSMLANLEESLGTF
QSTKAVYDHILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTY
LTKFI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
caggtgaagcatcgctgtgtgactgatcctgactatgaagatgtcaacaactgccacgag
agggcctttgttttcatgcacaagatgccacgtctatggctagattattgtcagttcttg
gtggaccagggccatatcactcacacacgctgcactttcaaccgtgccctccaggcgctg
cctatcacacagcactctcgtatttggcctttgtacttgcgcttcctgcgctcacaccca
ctacctgagacagccatgcggggctaccggcgcttcctcaagctgagccctgagagcgca
gaggaatacatagagtacctcaagtcaagtgactggctggacgaggctgcacagtgcctg
gccaccgtggtgaatgatgagcagttcatctccaagnctggcaagtccaactaccagctg
tggcgtgagctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg
gacaccatcatccgagggggccttacccgcttcacagaccagctgggcaagctctggtgt
tcactggctgactactacatccgcagtggccattttgagaaggctccggacgtgtatgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagttcgaggagagcatgattgcagcgaagatggagaccacctcggagctggggcgggaa
gaagaggatgacgtggacttggaactgcgcctggcccgctttgagcagctgatcagtcgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccacaccgtgtccatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacagtggaccccttcaaggctacgggcaaaccccatacgctgtgggttgca
tttgccaagttttatgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaagtggatgacctggcaagtgtgtggtgcgagtgtggt
gagctggagctccggcatgagaattacgaccaggccttgcggctgctgaggaaggcaaca
gcactgcccacccgccgggcagagtattttgacggcttggagcctgtgcagaaccatgcg
tacaaatcattaaaggtgtggtccatgcttgccaacttggaggaaagccttggcaccttt
cagtctaccaaggctgtgtatgaccatattctggacctgcgcatcgctaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tatgagcgtggcatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctat
ctgaccaaattcatc
DBGET
integrated database retrieval system
