Myotis brandtii (Brandt's bat): 102254720
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Entry
102254720 CDS
T02920
Symbol
COL2A1
Name
(RefSeq) collagen type II alpha 1 chain
KO
K19719
collagen type II alpha
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb04151
PI3K-Akt signaling pathway
myb04510
Focal adhesion
myb04512
ECM-receptor interaction
myb04518
Integrin signaling
myb04974
Protein digestion and absorption
myb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102254720 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102254720 (COL2A1)
04518 Integrin signaling
102254720 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102254720 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102254720 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102254720 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
myb00536
]
102254720 (COL2A1)
Glycosaminoglycan binding proteins [BR:
myb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102254720 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
102254720
NCBI-ProteinID:
XP_005877441
LinkDB
All DBs
Position
Un
AA seq
1418 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAG
EQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDE
KAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPG
KPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG
ESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVGPAGGPGFPG
APGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAG
APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEG
KRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPG
RPGEPGLPGARGLTGRPGDAGPQGKLGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKG
ANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPSGERGEQGAPGPSGFQGLPG
PPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDG
PKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPGKDGGRGLTG
PIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKG
EQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPG
SNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPGDDGPSGPDG
PPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTG
PAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAGPTGKQGDRG
EAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSG
DQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAGPPGNPGPPG
PPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDVEVDATLKSLNNQIESI
RSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPA
NVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNI
TYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTM
IEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccggcaaccaggaccaaagggacagaaaggagaacct
ggagacatcaaggatattgtaggacccaaaggaccccctgggcctcagggacctgccggt
gaacaaggacccagaggtgatcgtggcgacaaaggtgaaaaaggtgcccctggacctcgt
ggcagagatggagagcctgggacccctggaaatcctggcccccctggccctcctggcccc
cctggtccccctggccttggtggaaactttgctgcccagatggctggaggatttgatgag
aaggctggtggcgcccagatgggagtaatgcaaggaccaatgggccccatgggaccacga
ggacctccaggccctgctggtgctcccggacctcaaggatttcaaggcaaccctggtgaa
cccggggaacccggcgtctctggtcccatgggtccccgtggtcctccgggcccccctgga
aagcctggtgacgatggtgaagctggaaagcctggaaaatctggtgaaagaggccctccc
ggccctcagggtgctcgcggcttcccaggaaccccaggacttcctggtgtcaaaggtcac
agaggttacccaggcctggatggtgctaagggcgaagctggtgccccgggtgtgaagggc
gagagcggctcccctggtgagaatggttctccgggccccatgggtccccgtggtctgcct
ggtgagagaggacggactggccctgcaggcgccgtgggtgctcggggcaacgatggtcaa
ccaggccctgcagggcctccgggtcccgtgggtcctgctggcggtcctggcttccctggg
gctcccggtgccaagggtgaagctggtcccaccggtgctcgtggtcctgaaggcgctcaa
ggtcctcgcggtgaacctggcactcctgggtcccccgggccggctggtgcctctggcaac
cctggaacagatggaattcctggagccaaaggatctgctggtgctcctggcattgctggt
gctcccggcttccctgggccccggggtcctcctggccctcaaggtgcaactggtcctttg
ggcccgaaaggtcagacgggtgagcctggtattgctggcttcaaaggcgaacaaggcccc
aagggagaaactggccctgccggcccccagggagcccctggtcctgctggtgaagaaggc
aaaagaggtgcccgtggagagcctggtggtgctgggcccatcggcccccctggagaaaga
ggtgctcctggcaaccgtggtttccctggtcaagatggtctggccggtcccaagggagcc
cctggcgagcgagggcccagcggcctcgctggacccaagggagccaacggtgaccctggc
cgtcccggagagcctggccttcctggagctcggggtctcactggccgtcctggtgatgct
ggtcctcaaggcaaacttggtccttctggagcccccggtgaagacggtcgccccgggcct
cccgggccgcagggggctcgtgggcagcctggtgtcatgggtttccctggccccaaaggt
gccaacggcgagcctggcaaagctggtgagaaaggactgcccggtgctcctggtctgaga
ggtcttcctggcaaagatggtgagacaggtgctgcaggcccccctggacccgcgggacct
tcaggtgaacgaggcgagcagggtgctcccggaccatctggcttccagggactccctggc
cctcccggtcccccaggtgaaggtggaaaaccaggcgaccagggcgttcccggcgaagct
ggagcccccggcctcgtgggtcccagaggtgaacgaggtttcccaggtgaacgtggctct
cctggtgcccagggcctccagggtccccgtggcctccccggcactcccggcaccgatggt
cccaaaggtgcatctggcccagctggcccccctggggctcagggccctccaggtctgcag
ggcatgcccggtgagaggggagcagctggtatttctgggcccaagggagacaggggtgat
gttggtgagaaaggcccagagggagcccctgggaaggacggtggacgaggtctgacaggt
cccattggccctcctggcccggctggtgccaacggtgagaagggagaagttggccctcct
ggtcctgcgggaacggctggtgctcgaggtgccccgggtgaacgtggagagaccggacct
cccggacccgctggattcgctggtcctcccggtgctgatggccagccaggtgccaagggt
gagcaaggagaggccggccagaaaggcgacgctggtgcccccgggccgcagggcccctct
ggagctcctgggcctcagggtcctactggtgtgactggtcctaaaggagcccgaggtgct
caaggccccccgggagccaccggattccccggagctgctggccgcgtcggacccccaggc
tccaacggcaaccctggaccccctggtccccctggtccttctggaaaagatggccccaaa
ggtgctcgaggagacagtggccctcccggccgagccggtgaccccggcctccaaggtcct
gccggagcccctggcgagaagggagagcctggagatgatggtccctctggtcccgatggt
cctccaggtccccagggtctggctggtcagaggggcatcgttggtctgcccggacagcgt
ggtgagagaggattccccggcctgcccggcccatcgggcgagcctggcaagcagggagct
cctggtgcatctggagaccgagggccccctggccccgtgggcccccctgggctgactggt
cccgctggtgaacccggacgagagggaagccctggcgccgacggcccccctggcagagat
ggtgcagctggagtcaagggcgatcgtggtgagacgggtcccctgggtgctcctggagct
cctgggccccctggctctccaggccccgctggcccaactggcaagcagggagaccgagga
gaagctggcgcacaaggccccatgggccccgcaggaccagctggagcccgtgggatccca
ggccctcaaggcccccgaggcgacaaaggagagactggagaggctggcgagaggggactg
aagggacaccgtggcttcactggtctgcagggtctccctggccctcctggtccttctgga
gaccaaggtgcttctggtcctgctggtccttctggccctagaggtcctcctggccccgtc
ggtccctctggcaaagatggctctaatggaatccctggccccattggacctcctggtccc
cgtggacgttctggcgaaacaggccccgctggtcctcctggaaatcctggaccccctggc
cctccaggtccccccggccctggcattgacatgtcagcctttgctggcttaggcgggaga
gaaaaaggccccgaccccatgcagtacatgcgggccgatcaggcagccggcaatctgagg
cagcatgacgtagaggtggatgccacgctcaagtccctcaacaaccagattgagagcatc
cgcagccccgagggctcccgcaagaaccccgctcgcacctgccgggacctgaaactctgc
catccagaatggaagagcggagactactggatcgaccccaaccagggctgcaccttggac
gccatgaaggttttctgcaacatggagactggcgagacctgcgtctaccccaacccagcg
aacgttcccaagaagaactggtggagcagcaagagcaaagacaagaaacatatctggttt
ggagaaaccatcaacggtggcttccacttcagctacggggatgacaacctggctcccaac
actgccaacgtccagatgaccttcctgcgcctgctgtccactgaaggctcccagaacatc
acttaccactgcaagaacagcatagcctacctggacgaagcagctggcaacctcaagaag
gccctgctcatccagggttccaatgatgtggagatccgggctgagggcaacagcaggttc
acgtatacggtgctgaaggatggctgcacgaaacacaccggtaagtggggcaagactatg
atcgagtaccggtcacagaagacctcgcgcctccccatcattgacattgcacccatggac
ataggagggcctgagcaggaatttggtgtggacatagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system