Myotis brandtii (Brandt's bat): 102259725
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Entry
102259725 CDS
T02920
Symbol
SF3B1
Name
(RefSeq) splicing factor 3b subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102259725 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myb03041
]
102259725 (SF3B1)
03036 Chromosome and associated proteins [BR:
myb03036
]
102259725 (SF3B1)
Spliceosome [BR:
myb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102259725 (SF3B1)
Complex B
102259725 (SF3B1)
Complex C
U2 SnRNP specific factors
102259725 (SF3B1)
Chromosome and associated proteins [BR:
myb03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102259725 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
102259725
NCBI-ProteinID:
XP_014401047
LinkDB
All DBs
Position
Un
AA seq
1313 aa
AA seq
DB search
HRGDDSALVWRGRLLEIGDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRF
AGYVTSIAATELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPK
IADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMHARTYMDVMREQHLTKEEREIRQQ
LAEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLR
WDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKN
RWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTP
VLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEG
YKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDD
IQYFDKLLVDVDESILSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPL
FNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARV
EGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAV
CKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAA
LAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVML
ILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYR
QLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNSGAADIDHKLEEQ
LIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQA
ADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTP
PIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKK
AIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPA
LMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYICAVTPLLEDALMDRDLVHRQTASAV
VQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCL
QGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
caccgaggagacgactcggccctggtctggaggggtcgtctgcttgagattggggatatc
gaagcacagattcgagaaattcaaggcaagaaggcagctcttgatgaagctcaaggagtg
ggccttgattctacaggttattatgaccaggaaatatatggtggaagtgacagcagattt
gctgggtatgtgacatcaattgctgcaactgaacttgaagatgatgacgatgactactca
tcatctacaagtttgcttggtcagaagaagccaggatatcatgcccctgtggcattgctt
aatgatataccacagtcaacggaacagtatgatccatttgctgagcaccgacctccaaag
attgctgaccgggaagatgaatacaaaaagcacaggcggaccatgataatttccccagag
cgtcttgatccttttgcagatggagggaagacccctgatcctaaaatgcatgctagaacg
tatatggatgtaatgcgcgagcagcatttgactaaagaagagagagaaattaggcaacaa
ctagcagaaaaagctaaagctggagaactgaaagtcgtcaatggagcagcagcgtcccag
cctccctcaaaacgaaaacgccgttgggatcaaacagctgatcagactcctggtgccact
cccaagaagctgtcaagttgggatcaagcagagacccctggacataccccttccttaaga
tgggatgagacaccaggtcgtgcaaagggaagtgagactcctggagcaaccccaggctca
aaaatatgggatcctacaccaagtcacacaccagcgggagctgctactcctggacgcggt
gacacaccaggccatgcaacaccaggccacggaggcgcaacttctagtgctcgtaaaaac
cgctgggatgagacccccaagacagaaagagatactcctgggcatggaagtggatgggct
gagacgcctcgaacagatcgaggtggagattcaattggtgaaacacccactcctggagcc
agtaaaaggaaatcacgttgggatgaaacaccagctagtcagatgggtggaagcactcct
gttctgacccctgggaaaacaccaattggcacaccagccatgaacatggctacccctact
ccaggtcacataatgagtatgactcctgaacagcttcaggcttggcgttgggagagagaa
attgatgagagaaatcgcccactttctgatgaagaattagatgctatgtttccagaagga
tataaggtacttcctcctccagctggttatgttcctattcgaactccagctcgaaagctc
acggccactccaacacctttgggtggtatgacgggtttccacatgcaaactgaagacaga
actatgaaaagtgtcaacgaccaaccatctggaaatcttccctttttaaaacctgatgat
attcagtactttgataaacttttggtggatgttgatgaatcaatacttagtccagaagag
caaaaagagagaaaaataatgaaattgcttttaaaaattaagaatggtacacctccaatg
agaaaggctgcattgcgtcagattactgataaagctcgtgaatttggagctggtcctttg
tttaatcagatccttcctctactgatgtctcctacacttgaggatcaagaacgtcatttg
cttgtcaaagttattgatagaatattatacaaacttgatgacttagttcgaccatatgtg
cataagatccttgtggtcattgaaccattgctgattgatgaagattactatgctagagtg
gaaggccgagagattatttctaatttggcaaaggctgctggtctggctactatgatctct
accatgagacccgatatagataatatggatgaatatgttcgtaacacaacagctagagct
tttgctgttgtagcttctgccctgggcattccttcactattgcccttcttaaaagctgtg
tgcaaaagcaagaagtcctggcaagcgagacacactggtattaagattgtacagcagata
gctattcttatgggctgtgccatcttgccacatctgagaagtttagttgaaatcattgaa
cacggtcttgtggatgagcagcagaaagttcggaccattagtgcgttggccattgctgcc
ttggctgaagcagcaactccttatggtatcgaatcttttgattctgtgttgaagcctctg
tggaagggtatccgccaacacagaggaaagggtctggctgccttcttaaaggctattggg
tatcttattcctctcatggatgcagaatatgccaactactatactagagaagtgatgtta
atccttattcgagaattccaatctcctgatgaagaaatgaagaaaattgtgctgaaggtg
gtaaagcagtgctgtggaacagatggtgtagaagcaaactacattaaaacagagattctt
cctcccttttttaaacatttctggcaacacagaatggctttagatagaagaaattatcga
cagttagttgatactactgtggagttggctaacaaagtaggagcagcagaaattatatcc
aggatcgtggatgatctgaaagatgaagctgaacagtacagaaaaatggtgatggaaaca
attgagaagattatgggcaactcgggagcagcagatattgatcacaaacttgaagaacaa
ctgattgatggcattctttatgcttttcaagaacagactacagaggactcagtaatgttg
aacggatttggcacagtggtcaatgcacttggcaaacgggtgaaaccttacttgcctcag
atctgtggtacagttttgtggcgtttaaacaacaaatccgcaaaagttaggcaacaggca
gctgacttgatctctcgaactgctgttgttatgaagacttgccaagaggaaaaattgatg
gggcacttgggtgttgttttgtatgagtatttgggtgaagagtaccctgaagtattggga
agcattcttggagcactgaaggccattgtgaatgtaataggtatgcataagatgactcca
ccaattaaagatctgctgcctagactcactcccatcttaaagaacaggcatgaaaaagta
caagagaattgtattgatcttgttgggcgtattgctgacaggggagctgaatatgtgtca
gcaagggagtggatgaggatttgctttgagcttttggagctcttaaaagctcacaaaaaa
gctattcgtagagccacagtcaacacatttggttatattgcaaaggccatcggccctcat
gatgtgttggctacacttttaaacaacctcaaagttcaggaaaggcagaacagagtgtgt
accactgtagcaatagctattgtcgctgaaacatgttcacccttcacagtgctccctgcc
ttaatgaacgaatacagagttcctgaactcaatgttcaaaacggagtgttaaagtccctt
tccttcttgttcgaatatatcggtgaaatgggcaaggactacatttgtgctgtcacacca
ttactggaagatgctttaatggatagggaccttgtacacagacagacagctagtgcggtg
gtgcaacacatgtcactgggggtttatggatttggttgtgaagattcgctgaatcacttg
ttgaactatgtatggcccaatgtgtttgagacatctccccatgtaattcaggcagttatg
ggagccctggagggcttgagagttgctattggaccatgtagaatgttgcagtattgttta
cagggtttgtttcacccagcccgtaaggtcagagatgtgtattggaaaatttacaactcc
atctacattggttcacaggatgctctcatagcacattacccaagaatctataatgatgat
aagaacacctatattcgttatgaacttgactatatcttataa
DBGET
integrated database retrieval system
