Myotis brandtii (Brandt's bat): 102260346
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Entry
102260346 CDS
T02920
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102260346 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myb03019
]
102260346 (EDC4)
Messenger RNA biogenesis [BR:
myb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102260346 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
102260346 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EDC4L
WD40_CDC20-Fz
DUF445
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
102260346
NCBI-ProteinID:
XP_005876479
UniProt:
S7N9T9
LinkDB
All DBs
Position
Un
AA seq
1400 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESQRPPNTYNGDLNGLLVPDPLCSGDATS
ANKPGLRSKPSINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHVNSPQLACLDEAGNLFVWHLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEEGSPMVALLHEDRAEVWNLDMLRSNHSTWPVDVSQIKQGFIMVKGHSTYL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHELKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFAFGESRPELGAEGLSSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSTSLQQIASSPSNSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQMDG
SLTMSSSGGSSLQTSPRSLLPSLLPGPADKLTPKGPGQVPTAASALALELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEDLEPNSMASAASALHLLSP
RPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALSQEATAPDSQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASAAGGFSTKVPT
PRLPAKDWKTKGSPRTSPKLKRKGKKDDGDSAVGSRLTEHQVAEPPEDWPALIWQQQREL
AELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLNTSVATKLTAVEGSM
KENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKVREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQ
HQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPTTHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPVTRDHMGSVMAQVRQKLFQFLQAEPHNSL
SKVARRLSLMLHGLVTPSLP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatagaggacgccacgcagcacctacgggacattctc
aagctggaccggcccgcgggaggccccagtgcagagagccagcggccacctaacacctac
aatggtgacctcaatgggctcctggtcccagaccccctctgctcaggggatgctacttca
gcaaacaagcctggtctccggtccaagccatccattaacctgcaggagaagcaggtcatc
tgcctctcaggagatgacagctctacctgcattgggattttggccaaggaggtggaaatt
gtggccagcagtgactccagcatctcgagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtatgactgggagcagaaatactactatggcaacctgatcgctgtg
tccaactccttcttggcctatgccattcgggctgccaacaatggctcagcgatggtgcgg
gtgatcagtgtcagcacttcggagcggaccctgctcaagggcttcacaggcagtgtggct
gacctggccttcgcacacgtcaactccccgcagttggcctgcctagatgaggcaggaaac
ctgttcgtgtggcacttggctctggttaatggcaaaattcaagaagagattttggtccat
atccggcagccagagggtacgccactgaaccacttccgtaggatcatctggtgccccttc
attcccgaggagagtgaagactgctgtgaggagggcagcccaatggtggccctgttgcat
gaggacagggctgaggtgtggaacctggacatgctccgttccaaccacagcacctggccc
gtggatgtcagccaaatcaagcagggcttcatcatggtaaaaggccacagcacatacctg
agtgaaggggccctctcacctgatgggactgtcctggctacagcaagccatgatggcttt
gtcaagttctggcagatctacattgaggggcaggacgagccaagatgtctgcatgagttg
aagcctcatgatgggcggccactctcctgccttctattttgtgacaaccacaagaaacag
gaccctgaggtccctttctggaggtttctcattactggtgctgaccagaatcaggagtta
aagatgtggtgcacagtgtcttggacctgcctgcagaccattcgtttctctccagatatc
ttcagctcagtgagtgtgccccctagcctcaaagtttgcttggacctctcagcagaatac
ctgattctcagcgatgtacaacggaaggtcctttatgtgatggagctgctgcagaaccag
gaagaaggccgtgcctgcttcagttccatctctgagttcctgctcacccaccctgtactg
agcttcggtatccaggtggtgagtcgctgccggctgcggcacacggaggtgctgcctgct
gaggaagagaatgacagcctcggggctgatgggacccacggagctggtgccatggagtct
gcagccggtgtgctcatcaagctcttctgtgtgcatactaaggcattgcaagatgtgcag
atccgcttccaaccacagctgaaccctgatgtggtggccccactccccacccacactgcc
catgaggattttgcatttggagaatctcggcccgaactgggcgccgagggcctgagttca
gctactcacggctcccagcctgatctccgacgcattgtggagctacctgcacccgctgac
ttccttagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatgaca
cctagcacctccttgcaacagattgcttcatcccctagtaatagcagcagtagcagcagc
agcagcagcagctcctctcttacagctgtatctgccatgagcagtacctcagctgtggac
ccctccttgcccaggccacctgaggagctgaccttgagccccaagctgcagatggatggc
agtctgacaatgagcagcagcggcggcagcagcctgcagacaagcccacgcagcctcctg
cccagcctgctcccaggtccagctgacaaattaactcccaaagggcctggacaggtacct
actgctgcctctgcactcgccctggagctgcaggaagtagagcccttggggctaccccag
gcttcccccagccgtacccgctctcctgatgttatctcctcggcgtccactgccctgtcc
caggacatccctgagatcgcatctgaggccctgtcccgtggctttggctcctctgctcct
gaggaccttgagccaaacagtatggcctcagctgcctctgcactacatctgctgtccccg
cgcccccggccagggcctgagcttggcccccagcttagcctggatggaggcccgggggat
ggggatcggcatagtaccccttcccttctggaggcagccttgtcccaggaggccacagcc
cctgacagtcaggtctggccaacagcaccagacattactcgggagacctgcagcagtctc
gcagaaagccctaggaatggccttcaggaaaagcataagagcctggccttccaccgacca
ccttatcacttgctgcagcaacatgacagccaggacaccagcgctgaacaaagtgaccac
gatgatgaggtggccagccttgcctctgctgcagggggctttagcaccaaagttcccact
ccacgactgcctgccaaggactggaagactaagggatcccctcggacctcacccaagctc
aagaggaagggcaaaaaggatgacggggattcagccgtgggatcccggctcacggagcac
caggtggcagagccccctgaggactggccagcactaatttggcaacagcagagagagctg
gcggagctgcggcacagccaagaagagctgctgcagcgtctgtgcacccagctcgaaggc
ctgcagagcaccgtcacaggccacgtggaacgtgccctcgagtctcggcacgaacaggag
cagcggcggctggagcgggcactggccgaggggcagcaacggggtgggcagctgcaggaa
cagctgacacaacagctgtcccaggcactgtcttcagctgtggccgggcgactggagcgg
agcatacgggatgagatcaagaagacggtgcctccatgtgtctctaggagtctggagcct
gtggcaggccaactgaacacctcagtggccaccaagctcacggctgtggagggtagcatg
aaagagaatatctccaagctgctgaagtccaagaacttgacagatgccatcgcccgagca
gctgcagacacgttacaggggcccatgcaggccgcctaccgtgaagccttccagagtgtg
gtgctgcctgcctttgagaagagctgccaggctatgttccagcagatcaatgatagtttc
cgactgggcacacaggaatacttgcaacagctagagagccacatgaagagccggaaggtg
cgagagcaggaggcgagggagcctgtattagctcagctgcggggcctggtcagcacactg
cagggcgccactgagcagatggcagccactgtgtccagcagtgttcgagctgaagtgcag
caccagctgcatgtggctgtgggcagcctgcaggagtccattttagcacaggtacagcgc
attgttaagggtgaggtgagtgtggcactcaaggagcagcaggccgccgtcacctctagc
atcatgcaggccatgcgctcagctgctggcacacctgtccctactacccacctcgactgc
caggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgacagctgctgacctgaacctggtgctatatgtttgtgaaactgtggac
ccaggccaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctc
atccagcagctggcctctgaccttggcactcgaactgacctcaagctaagctacttggaa
gaggctgtgatgcatctggaccacagtgaccctgtcactcgggaccacatgggctccgtc
atggcccaggtgcgccagaagctcttccagttcctgcaggccgaaccacacaactcactc
agcaaagtggcccggcgtctcagcctcatgttgcatggccttgtgacccccagcctccct
tag
DBGET
integrated database retrieval system