KEGG   Myotis brandtii (Brandt's bat): 102260346
Entry
102260346         CDS       T02920                                 
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
myb  Myotis brandtii (Brandt's bat)
Pathway
myb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:myb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102260346 (EDC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myb03019]
    102260346 (EDC4)
Messenger RNA biogenesis [BR:myb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102260346 (EDC4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     102260346 (EDC4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EDC4L WD40_CDC20-Fz DUF445 Beta-prop_TEP1_2nd Beta-prop_HPS5 WDR55
Other DBs
NCBI-GeneID: 102260346
NCBI-ProteinID: XP_005876479
UniProt: S7N9T9
LinkDB
Position
Un
AA seq 1400 aa
MASCASIDIEDATQHLRDILKLDRPAGGPSAESQRPPNTYNGDLNGLLVPDPLCSGDATS
ANKPGLRSKPSINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHVNSPQLACLDEAGNLFVWHLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEEGSPMVALLHEDRAEVWNLDMLRSNHSTWPVDVSQIKQGFIMVKGHSTYL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHELKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFAFGESRPELGAEGLSSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSTSLQQIASSPSNSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQMDG
SLTMSSSGGSSLQTSPRSLLPSLLPGPADKLTPKGPGQVPTAASALALELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEDLEPNSMASAASALHLLSP
RPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALSQEATAPDSQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASAAGGFSTKVPT
PRLPAKDWKTKGSPRTSPKLKRKGKKDDGDSAVGSRLTEHQVAEPPEDWPALIWQQQREL
AELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLNTSVATKLTAVEGSM
KENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKVREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQ
HQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPTTHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPVTRDHMGSVMAQVRQKLFQFLQAEPHNSL
SKVARRLSLMLHGLVTPSLP
NT seq 4203 nt   +upstreamnt  +downstreamnt
atggcctcctgcgcgagcatcgacatagaggacgccacgcagcacctacgggacattctc
aagctggaccggcccgcgggaggccccagtgcagagagccagcggccacctaacacctac
aatggtgacctcaatgggctcctggtcccagaccccctctgctcaggggatgctacttca
gcaaacaagcctggtctccggtccaagccatccattaacctgcaggagaagcaggtcatc
tgcctctcaggagatgacagctctacctgcattgggattttggccaaggaggtggaaatt
gtggccagcagtgactccagcatctcgagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtatgactgggagcagaaatactactatggcaacctgatcgctgtg
tccaactccttcttggcctatgccattcgggctgccaacaatggctcagcgatggtgcgg
gtgatcagtgtcagcacttcggagcggaccctgctcaagggcttcacaggcagtgtggct
gacctggccttcgcacacgtcaactccccgcagttggcctgcctagatgaggcaggaaac
ctgttcgtgtggcacttggctctggttaatggcaaaattcaagaagagattttggtccat
atccggcagccagagggtacgccactgaaccacttccgtaggatcatctggtgccccttc
attcccgaggagagtgaagactgctgtgaggagggcagcccaatggtggccctgttgcat
gaggacagggctgaggtgtggaacctggacatgctccgttccaaccacagcacctggccc
gtggatgtcagccaaatcaagcagggcttcatcatggtaaaaggccacagcacatacctg
agtgaaggggccctctcacctgatgggactgtcctggctacagcaagccatgatggcttt
gtcaagttctggcagatctacattgaggggcaggacgagccaagatgtctgcatgagttg
aagcctcatgatgggcggccactctcctgccttctattttgtgacaaccacaagaaacag
gaccctgaggtccctttctggaggtttctcattactggtgctgaccagaatcaggagtta
aagatgtggtgcacagtgtcttggacctgcctgcagaccattcgtttctctccagatatc
ttcagctcagtgagtgtgccccctagcctcaaagtttgcttggacctctcagcagaatac
ctgattctcagcgatgtacaacggaaggtcctttatgtgatggagctgctgcagaaccag
gaagaaggccgtgcctgcttcagttccatctctgagttcctgctcacccaccctgtactg
agcttcggtatccaggtggtgagtcgctgccggctgcggcacacggaggtgctgcctgct
gaggaagagaatgacagcctcggggctgatgggacccacggagctggtgccatggagtct
gcagccggtgtgctcatcaagctcttctgtgtgcatactaaggcattgcaagatgtgcag
atccgcttccaaccacagctgaaccctgatgtggtggccccactccccacccacactgcc
catgaggattttgcatttggagaatctcggcccgaactgggcgccgagggcctgagttca
gctactcacggctcccagcctgatctccgacgcattgtggagctacctgcacccgctgac
ttccttagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatgaca
cctagcacctccttgcaacagattgcttcatcccctagtaatagcagcagtagcagcagc
agcagcagcagctcctctcttacagctgtatctgccatgagcagtacctcagctgtggac
ccctccttgcccaggccacctgaggagctgaccttgagccccaagctgcagatggatggc
agtctgacaatgagcagcagcggcggcagcagcctgcagacaagcccacgcagcctcctg
cccagcctgctcccaggtccagctgacaaattaactcccaaagggcctggacaggtacct
actgctgcctctgcactcgccctggagctgcaggaagtagagcccttggggctaccccag
gcttcccccagccgtacccgctctcctgatgttatctcctcggcgtccactgccctgtcc
caggacatccctgagatcgcatctgaggccctgtcccgtggctttggctcctctgctcct
gaggaccttgagccaaacagtatggcctcagctgcctctgcactacatctgctgtccccg
cgcccccggccagggcctgagcttggcccccagcttagcctggatggaggcccgggggat
ggggatcggcatagtaccccttcccttctggaggcagccttgtcccaggaggccacagcc
cctgacagtcaggtctggccaacagcaccagacattactcgggagacctgcagcagtctc
gcagaaagccctaggaatggccttcaggaaaagcataagagcctggccttccaccgacca
ccttatcacttgctgcagcaacatgacagccaggacaccagcgctgaacaaagtgaccac
gatgatgaggtggccagccttgcctctgctgcagggggctttagcaccaaagttcccact
ccacgactgcctgccaaggactggaagactaagggatcccctcggacctcacccaagctc
aagaggaagggcaaaaaggatgacggggattcagccgtgggatcccggctcacggagcac
caggtggcagagccccctgaggactggccagcactaatttggcaacagcagagagagctg
gcggagctgcggcacagccaagaagagctgctgcagcgtctgtgcacccagctcgaaggc
ctgcagagcaccgtcacaggccacgtggaacgtgccctcgagtctcggcacgaacaggag
cagcggcggctggagcgggcactggccgaggggcagcaacggggtgggcagctgcaggaa
cagctgacacaacagctgtcccaggcactgtcttcagctgtggccgggcgactggagcgg
agcatacgggatgagatcaagaagacggtgcctccatgtgtctctaggagtctggagcct
gtggcaggccaactgaacacctcagtggccaccaagctcacggctgtggagggtagcatg
aaagagaatatctccaagctgctgaagtccaagaacttgacagatgccatcgcccgagca
gctgcagacacgttacaggggcccatgcaggccgcctaccgtgaagccttccagagtgtg
gtgctgcctgcctttgagaagagctgccaggctatgttccagcagatcaatgatagtttc
cgactgggcacacaggaatacttgcaacagctagagagccacatgaagagccggaaggtg
cgagagcaggaggcgagggagcctgtattagctcagctgcggggcctggtcagcacactg
cagggcgccactgagcagatggcagccactgtgtccagcagtgttcgagctgaagtgcag
caccagctgcatgtggctgtgggcagcctgcaggagtccattttagcacaggtacagcgc
attgttaagggtgaggtgagtgtggcactcaaggagcagcaggccgccgtcacctctagc
atcatgcaggccatgcgctcagctgctggcacacctgtccctactacccacctcgactgc
caggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgacagctgctgacctgaacctggtgctatatgtttgtgaaactgtggac
ccaggccaggtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctc
atccagcagctggcctctgaccttggcactcgaactgacctcaagctaagctacttggaa
gaggctgtgatgcatctggaccacagtgaccctgtcactcgggaccacatgggctccgtc
atggcccaggtgcgccagaagctcttccagttcctgcaggccgaaccacacaactcactc
agcaaagtggcccggcgtctcagcctcatgttgcatggccttgtgacccccagcctccct
tag

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