KEGG   Myotis brandtii (Brandt's bat): 102263604
Entry
102263604         CDS       T02920                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
myb  Myotis brandtii (Brandt's bat)
Pathway
myb03013  Nucleocytoplasmic transport
myb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:myb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102263604
  09122 Translation
   03013 Nucleocytoplasmic transport
    102263604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myb03019]
    102263604
   03041 Spliceosome [BR:myb03041]
    102263604
Messenger RNA biogenesis [BR:myb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102263604
Spliceosome [BR:myb03041]
 Complex C
  Other components
   EJC/TREX
    102263604
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102263604
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd eIF2A Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_RFWD3 Beta-prop_EML Beta-prop_WDR36-Utp21_1st RMC1_N DSE1_N Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N NBCH_WD40 Beta-prop_HPS5 Tricorn_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th TRM82_WD B-prop_COPA_B_2nd PD40 Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 Beta-prop_SPT8 PAC11 Beta-prop_EIPR1 Beta-prop_WDR75_1st ASA1 Beta-prop_WDR41 Cytochrom_D1 DPPIV_N Beta-prop_Nup120_160 Beta-prop_ELP1_1st Beta-prop_NWD2_C DUF7099 YNCE PCYCGC PROPPIN
Other DBs
NCBI-GeneID: 102263604
NCBI-ProteinID: XP_005865913
UniProt: S7MVS7
LinkDB
Position
Un
AA seq 343 aa
MAVPAAAMGPGSMAHWCSVSSGPTRYVLGMQELFLGHSKTREFPVHSAKVHSVTWSCDGQ
RLASGSFDKTASIFLLEKDRLVKENNYCGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWD
VRTTKCITTVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHSSKVEEQFKFEVNEI
SWNNDNDMFFLTDGNGCINILSYPELKHVQSIKAHPSNCICIKFDPTGKYFATGSADALV
SLWDVDELVCVRCFSRLCWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWQVKCES
PTFTVAWHPKRPLLAFACDDKDGKCDSSQEAGTVKLFGLPNDS
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggcggtacccgcagctgctatggggcctggctccatggcccactggtgctccgtgagc
agtggcccgacacgctacgtgctgggcatgcaggagctgttcttgggccacagcaagacg
cgcgagttcccggtgcacagcgcgaaggtgcactcagtgacctggagctgcgacgggcag
cgtctggcctctgggtccttcgacaagactgctagcatcttcttgctagagaaggaccgg
ttggtcaaagaaaacaattactgcggacatggcgacagcgtggaccagctgtgttggcat
ccaagtaaccctgacctcttcgtcacagcatctggagacaaaaccattcgcatctgggat
gtgaggactaccaaatgcatcactactgtgaacactaaaggggagaacattaatatctgt
tggagtcctgatgggcagaccatagctgtaggcaacaaggatgatgtggtgacctttatt
gatgccaagacacacagttcaaaagtggaggagcagttcaagtttgaggtcaatgaaatc
tcctggaacaatgacaatgacatgttcttcctgacagatggcaatggttgcatcaacatc
ctcagctacccagagctgaagcatgtgcagtccatcaaggcgcacccttctaactgcatc
tgcatcaagtttgaccccacagggaagtactttgccacaggaagtgcagatgctttggtc
agcctctgggatgtggatgagttagtgtgtgttcggtgcttttccaggctgtgttggcct
gtgaggaccctcagtttcagccacgatgggaaaatgctggcttcagcatcagaagatcac
tttattgacattgctgaagtagagacaggagacaagctatggcaggtgaaatgtgagtcc
ccgaccttcactgtggcttggcacccaaaaaggcctctgctggcatttgcctgtgatgac
aaagatggcaaatgtgacagtagtcaggaagcaggaactgtgaagctgtttgggcttccc
aatgattcctga

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