Mycolicibacterium sp. ELW1: ACRDU6_11265
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Entry
ACRDU6_11265 CDS
T11897
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
myce Mycolicibacterium sp. ELW1
Pathway
myce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACRDU6_11265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myce03019
]
ACRDU6_11265
03009 Ribosome biogenesis [BR:
myce03009
]
ACRDU6_11265
Enzymes [BR:
myce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACRDU6_11265
Messenger RNA biogenesis [BR:
myce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACRDU6_11265
Ribosome biogenesis [BR:
myce03009
]
Prokaryotic type
rRNA helicases
ACRDU6_11265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
XUV48877
LinkDB
All DBs
Position
2134585..2136291
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AA seq
568 aa
AA seq
DB search
MTTPDDAPQTFADLQIHPAVLQAVSDVGYETPSAIQAATIPALLAGSDVVGLAQTGTGKT
AAFAIPILSKIDPANRTTQALVLAPTRELALQVAEAFSRYGAHLKVNVLPIYGGSSYVPQ
LAGLKRGAQIVVGTPGRVIDHLEKGSLDLSHLDYLVLDEADEMLQMGFAEDVERILADTP
EYKQVALFSATMPPGIKKITTKYLHDPVEVTVKSKTQTAENITQRYYLVSYPRKMDALTR
LLEVEQGDGMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTISQLKDGSIDI
LVATDVAARGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTALLFVTPREKHLLN
SIERVTRQKLVEGQLPSVEDVNAQRVEKFKDSITDALNAPGVEMFRRLIEDYERDNDVPL
TDIAAALALQSRNGEEFLLTEPPPEKRRERPDRPDRPDRERAPRKTRDDLATYRVAVGKK
HKVGPGSIVGALANEGGLHRSDFGHITIKNDFSLVELPAKLSKETLKALEKTRISGVLID
LKPDRGSPRYDARPDSRPSGGKPRRTSR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccccggacgacgccccccagaccttcgccgacctgcagatccaccccgcggtg
ctgcaggccgtttccgatgtcggctacgaaaccccctcggcgatccaggccgccaccatc
ccggcattgctggccggctccgacgtggtgggcctggcgcagaccggcaccggcaagacg
gccgccttcgcgatcccgattctgtccaagatcgaccccgccaaccgcaccacccaggcc
ctggtgctggcgccgacacgtgagctggccctgcaggtggccgaggcgttcagccgctac
ggcgctcacctcaaggtcaatgtgctgccgatctatggcggctcctcgtacgtgccacag
ctggccggcctcaagcgcggcgcacagatcgtcgtcgggacgccgggacgcgtcatcgac
catctggagaagggcagcctcgacctgtcgcacctggactacctggtgctcgacgaggcc
gacgagatgctgcagatgggtttcgccgaggacgtcgagcgcatcctggccgacaccccg
gagtacaagcaggtcgcgctgttctcggccaccatgccgccgggcatcaagaaaatcacc
accaaatacctgcatgacccggtcgaggtcacggtcaagtcgaagacccagaccgccgag
aacatcacccagcgctattacctggtgtcctatccgcgcaagatggacgcgctgacccgg
ctgctcgaggtcgagcagggcgacgggatgatcgtgttcgtccgcaccaagcaggccacc
gaggaggttgctgagaagctgcgggcccgcgggttcgccgcggcggccatcaacggcgac
attccgcaggccgtgcgtgagcgcacgatcagccagctgaaggacggctcgatcgacatc
ctggtcgccaccgatgtggccgcccgcggattggacgtcgagcgcatctcgcatgtggtg
aatttcgacatcccgcacgaccccgagtcctacgtgcaccggatcgggcgcaccggccgc
gccggccgctcgggcaccgcactgctgttcgtcaccccgcgcgagaagcacctgctgaac
tcgatcgagcgggtcacccggcagaagctcgtcgagggccaactgccgtcggtcgaagac
gtcaatgcccagcgggtggagaagttcaaggactcgatcaccgatgcgctcaatgccccc
ggggttgagatgttccgccggttgatcgaggactacgagcgcgacaacgatgtgccgttg
accgatatcgccgcggcactggctctgcagagccgcaacggcgaagaattcctgctgacc
gaaccgccgccggagaagcgccgcgaacggcccgaccggccggatcgcccggaccgcgaa
cgtgcgccccgcaagacccgcgatgatctggccacctaccgcgtcgcggtcggcaagaag
cacaaggtcggtccggggtcgatcgtcggtgcgctcgccaacgagggcgggctgcaccgc
agcgatttcgggcacatcacgatcaagaacgatttctcgctggtcgagctgcccgccaag
ctgtccaaggagacgctgaaagcgcttgagaagactcgtatttccggtgtgttgatcgat
ctgaagcctgatcgcggcagcccacgatacgacgcgcgtccagactcgcgtccctccggc
gggaagccccggcgcacgagccgatga
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