Mycoavidus sp. B2-EB: MPB2EB_0256
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Entry
MPB2EB_0256 CDS
T09873
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPB2EB_0256 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myco03021
]
MPB2EB_0256 (rpoA)
03400 DNA repair and recombination proteins [BR:
myco03400
]
MPB2EB_0256 (rpoA)
Enzymes [BR:
myco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPB2EB_0256 (rpoA)
Transcription machinery [BR:
myco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPB2EB_0256 (rpoA)
DNA repair and recombination proteins [BR:
myco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPB2EB_0256 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BBO59151
LinkDB
All DBs
Position
279229..280206
Genome browser
AA seq
325 aa
AA seq
DB search
MQNNLLKPRIIAVEMVGGNHAKVVMEPFERGYGHTLGNALRRVLLSSMTGYAPTEVAIGG
VVHEYSTMDGVQEDVINLLLNLKGIVFLLHNRDEVTVSLRKEGEGIVTAADIELPHDCEV
INPEYVIAHLSKGGKLDLQIKVEKGRGYVPGNVRHYGEEATRSVGRIVLDASFSPVRRVS
YTVESARVEQRTDLDKLVMNIETNGALSPEEAIRQAAGILVDQLSVFAALEGSEVSAELP
SRAPQIDPILLRSVEDLELTVRSLNCLKAENIYYIGDLIQRTENELLKTPNLGKKSLNEI
KEVLATRGLALGMKLETWPPVNLDR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaatctgttgaagcccaggataattgcagttgagatggtgggcggcaaccat
gcaaaagtggtcatggaaccttttgagcgtggctatggccatactttaggcaatgcgcta
aggcgcgtgttgttgtcctcaatgactggctatgcaccaactgaggttgcgattggcggg
gtcgtgcacgaatattcgactatggatggcgtgcaagaagatgtaatcaatttgttgttg
aatttaaaagggattgtctttctcttgcataaccgcgatgaagtcaccgtttcattgcgt
aaagaaggcgaaggcatcgtcaccgctgccgatattgagctgccacatgactgcgaggtg
attaatccagaatatgtgatcgcgcacctctccaaagggggcaagcttgaccttcagatt
aaggttgagaaaggccgcggctatgtacctggcaacgttcgccattatggtgaagaagcg
acccgatcggtcggtcggattgtgttagacgcttcattttctccagttaggcgagtgagc
tatacagtggagagcgcgcgcgttgagcagcgtactgatctcgataaattagtcatgaac
atcgagacaaatggcgcgctatcaccggaagaggccattcgtcaggcggcagggatttta
gttgatcagttatcggtattcgctgcactagaaggttctgaagtcagtgccgagcttcct
tcacgagcaccgcaaattgacccgattctgctgcgttcagtggaagatctggagttgacc
gtacgctccttgaattgtttgaaagctgaaaatatttactatatcggcgatctgattcag
cgtactgagaatgagttactgaaaacaccgaacctcggtaaaaaatcactcaacgagatc
aaagaggtgcttgccacacgtggcttggcgctaggtatgaaacttgaaacttggccaccc
gtcaatcttgatagataa
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