Mycoavidus sp. B2-EB: MPB2EB_0267
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Entry
MPB2EB_0267 CDS
T09873
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco00300
Lysine biosynthesis
myco00470
D-Amino acid metabolism
myco01100
Metabolic pathways
myco01110
Biosynthesis of secondary metabolites
myco01120
Microbial metabolism in diverse environments
myco01230
Biosynthesis of amino acids
Module
myco_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MPB2EB_0267 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MPB2EB_0267 (lysA)
Enzymes [BR:
myco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MPB2EB_0267 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
SH3BP5
Motif
Other DBs
NCBI-ProteinID:
BBO59162
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Position
complement(291811..293079)
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AA seq
422 aa
AA seq
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MFDNPFQYINDELHAEDVPLTTLAEQFGTPLYVYSRAALTHAYQAYARACAGYRANIYYA
VKANSNLAVLDLFARLGAGFDIVSGGELARVLKIGACTDKIVFSGVGKSAVEMQIALNAG
VKCFNIESLAELHRLHDIAAHANKTARVSLRVNPDVDAKTHPYISTGLKSNKFGIAFDEA
RAAYRAAASMKYLEIVGIDCHIGSQITEIAPYLDALDKILELIETLEADGIQISHLDMGG
GLGIRYDAETPPAISTFVHTLLNHLTERGHGSREILFEPGRSLVGNAGVLLTTIEYLKPG
AVKNFAIVDAGMNDLARPAMYQAYHDLVPVLKHPNPPPTALYDVVGPVCESGDWLGHDRT
LALKPGDLLAARSAGAYSFTMSSNYNTRPRAAEVMVEGKQAYLVRARETVEQLFSAEMKL
PD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataacccttttcaatatattaacgacgaattgcacgcagaagatgtgccactc
acaacgcttgccgaacaatttggcacgccgctttacgtttactcacgcgcagcgctgact
cacgcatatcaagcctacgcgcgcgcatgcgctgggtaccgggcaaatatttattacgcc
gttaaagcgaatagcaatctcgctgtgctcgatctcttcgcgcgcttaggcgctggtttt
gacatcgtatcaggcggtgaattagcgcgcgtactcaagattggcgcgtgcaccgataaa
attgttttttcaggcgttggcaaaagcgcggtagagatgcaaatagcgttgaatgctggc
gtcaaatgtttcaatatcgaatcgcttgctgaactacaccgtttgcatgatattgcagct
catgccaacaaaaccgcacgagtgtcattacgcgttaacccggacgtagatgcaaaaacg
catccgtatatttcgactggacttaaatcgaataaatttggcattgcttttgatgaggca
cgagcagcttatcgcgcggcagcaagcatgaaataccttgaaatcgtcggcattgactgc
catatcggctcacaaattacagaaattgcgccttatctcgatgcgttagataaaatactt
gagctgattgaaacacttgaagcggatggcatccagatttctcatctcgatatgggggga
ggactcggtattcgctatgacgctgaaaccccgcctgccatcagtacttttgtgcatact
ctgctcaatcatcttactgagcgaggccacggcagccgtgaaattttatttgagccaggc
cgttcattagtgggcaacgcaggcgtattgctgaccacaatcgaatatctgaaaccgggc
gcagtcaagaattttgcaattgtcgatgccggcatgaatgatctcgcccggccagcaatg
tatcaagcctatcatgatttggtgcccgttctaaaacaccctaatcccccccccactgca
ctctacgacgtagtcggtccggtttgcgaaagtggcgattggctaggccacgatagaact
ttggcactcaagccaggagatttgcttgccgcccgctcagccggtgcgtatagctttacg
atgagttctaattacaatacgcggccacgcgcagcagaagtcatggtagaagggaaacag
gcctatttagtacgcgcgcgcgaaaccgttgaacagttattctcggctgaaatgaaactg
ccggattaa
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