Mycoavidus sp. B2-EB: MPB2EB_0508
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Entry
MPB2EB_0508 CDS
T09873
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MPB2EB_0508 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myco03019
]
MPB2EB_0508 (rnc)
03009 Ribosome biogenesis [BR:
myco03009
]
MPB2EB_0508 (rnc)
03036 Chromosome and associated proteins [BR:
myco03036
]
MPB2EB_0508 (rnc)
Enzymes [BR:
myco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MPB2EB_0508 (rnc)
Messenger RNA biogenesis [BR:
myco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MPB2EB_0508 (rnc)
Ribosome biogenesis [BR:
myco03009
]
Eukaryotic type
90S particles
RNase
MPB2EB_0508 (rnc)
Prokaryotic type
rRNA processing factors
MPB2EB_0508 (rnc)
Chromosome and associated proteins [BR:
myco03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MPB2EB_0508 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Dicer_dsRBD
DSRM_2
DUF8844
Motif
Other DBs
NCBI-ProteinID:
BBO59392
LinkDB
All DBs
Position
560779..561651
Genome browser
AA seq
290 aa
AA seq
DB search
MIYGWERAEFPPCNIPSKNGSLSLYVLAGCARCVILNAMPLSLLENRLHYVFRNKKYLQQ
AMTHRSHSANHNERLEFLGDSILNCTVAALLFKRFSELNEGDLSRVRANLVKQQSLYEIA
QSLNLAEALRLGEGELKNGGSQRPSILADTLEAILGAIYLDGGFAAVHTVIEDLYAPFLK
HIDPETLGKDAKTLLQESLQGRKIPLPHYTVVATRGAAHSQQFEVECAVPIYEIKVFGVG
TSRRVAEQAAAKRALEAIQTLPAAALASPKRVKYARQPKPSVLGKTKVKL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgatttatgggtgggagcgtgctgagttcccgccctgcaatataccctctaaaaacggc
tcgttatcgttatatgttttagcagggtgtgcgcgttgcgttatacttaatgctatgccc
ttatctttgctagaaaaccggttgcattacgtattccgtaataagaaatatttgcaacag
gccatgacccaccgcagccatagcgcaaatcataacgaacggctggaattcctcggcgat
tcgatcttgaattgcacggtagcggcgctgctatttaaacgcttttctgaattaaacgag
ggtgatttgtcgcgcgtgcgcgcaaatttagtgaagcaacagtcgctttatgaaattgct
caatcgctcaatcttgccgaagcattacgcttgggcgagggcgaattaaaaaacggcggt
agccagcggccgtcaattttagcagatacgcttgaggccatcttaggcgcaatttattta
gatggtggctttgccgccgtgcacactgtgattgaagatctctatgcgccgttccttaag
catattgatcctgagacactaggtaaagacgcaaaaaccctcttgcaagagtctttgcaa
ggccgcaaaatcccgctgccgcactatactgtagtggcgactcgtggggccgcccatagc
cagcagttcgaggttgaatgcgcggtgcctatttatgaaattaaagtgttcggcgttgga
acgagccgtcgcgtggctgaacaagctgcggcaaagcgcgcgttagaagcgatccaaact
ttgccggccgcggcgctcgctagccctaaacgcgtaaaatatgcacgccagccaaaaccc
agcgtgcttggcaaaacaaaagtaaagttgtga
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