Mycoavidus sp. B2-EB: MPB2EB_0646
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Entry
MPB2EB_0646 CDS
T09873
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MPB2EB_0646 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myco03400
]
MPB2EB_0646 (recC)
Enzymes [BR:
myco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MPB2EB_0646 (recC)
DNA repair and recombination proteins [BR:
myco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MPB2EB_0646 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BBO59526
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All DBs
Position
707979..711467
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AA seq
1162 aa
AA seq
DB search
MFKLFYSNRYETLAQALLDDLAADPLDPWSTPSIIVPSVALRRRLELDIATRFGICMNVD
FAYLAQWLWAQLGRIYEVPKHSPFASEQLVWHCYRWLDARRWPAEHNARLSAYLQAADAT
MRYELAQRVALLFEQYLTYRPDWLNAWYAGHSPIALRTTAPSSNDAGTQATWRSDEAWQA
QLWRRLFAELAAPGETAPAAYRFLTEAATLKPEAVARAAWPKCVRVFALPTIPPLHLALL
RELARWIEVRLYLMNPCREYWHDIVDAARVSALALDNKVDYHETGNVLLAEWGKQTQAQL
HLLQELSEGALSTETALYIENEAPTWLAALQNAILNLQRWPVPPAAGKEAETGVEVHVCH
SLMRQLEVLHDRLLGLFDANPAWMPADVLVVLPNLTAAAPLIDAVFGATDSKRHIPYRIT
GLPRLQSNPMARVLYEMLELPARSIGVVALIEWLRTDALAARYAIRAEDKTQMDAATSTQ
RQEGGGDAVFETIRLWLASALARRGLAPAHEVLTAQENLSAPERHTFADALMRLYLGYAL
PAGALPLAEYLPMLSLSGAQASLLGSLSRFIDDLAEFADACAQAHSATAWRAILLNALER
FFAIDAESAQPITELRDIIIALTGAIAAGDATQQAIPAAVLRMAFGRVLNEPARGGVPTG
GVTFSALTSLRGLPYRVVCILEAGEGVLPGKVRTDEFDLMAAFSQAGDRQRRDDERAVFL
DLVLAARNYLLLAYTGRSIRDNTPLPSAAVVSELLDYLSQALAGPNATQAEMVAARARLV
IEHPLQAFAVEYLNHESRLFTYDPDRAEIASALRSNPSSAEGHALPFFSAPLPLEDSQEI
FLDDFERFWQHPGRALLRDRLGIALAHAPREQSDFAPFALEYAGRDALAKRLLPGLLAQG
DTPPETSPANQTQSVPKLLFERASRIALASPELPDGATGVFEGTRELNALAALAARIRAA
RAAGVASYPFAFELEPKWPAAPSVCNELAAVAALDARIQFTGVLENVSQEGLLLYRSGRP
NARDYLSAWLCHLVLCELAPEGVKPRTVWLGDSTDFTLNRVQDARRYLNELIALYRVGRC
APLHFFPKSAWALMSDGEDAARRIWVGNQGTASHSVAEMDDIWFQLMLRGESLEGMLDAR
FKALAQTVFAPLLEHLELARSR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagctgttttattcaaatcgctacgaaacactcgctcaggctttgctggacgat
ctggccgccgatccgcttgatccttggtccactccctccattattgtgccaagcgttgcc
ctacgtcgccgtcttgaattagatattgcaacccgctttggcatatgcatgaatgttgat
tttgcgtacttagcgcagtggctatgggcacagcttggccgcatatatgaggttcccaag
cattctccttttgcgtcagaacagttggtatggcattgttatcgttggttggacgcgcgt
cgctggccggctgaacataacgcgcgactcagcgcctatttgcaggcggctgacgctacc
atgcgttatgaacttgcccagcgggttgcgttactttttgagcaatatttaacctatcgc
ccggactggcttaatgcttggtatgccgggcactcgccgattgcactgcgcactacagcg
ccaagctcaaacgatgctggcacacaggctacctggcgcagtgatgaggcttggcaagcc
caattatggcgtcggctgtttgctgaacttgcggcgccaggcgagactgcgcctgctgcc
tatcgctttttgactgaggcggctacgctaaagccagaggcggtggcgcgcgcggcttgg
cctaaatgtgtgcgagtttttgctttacctacaataccgccattgcacctggctctattg
cgtgaacttgcgcgctggatcgaggtgcgcttatatctgatgaacccttgccgtgaatac
tggcatgacattgtcgatgcggcccgagtcagtgcattggcgttagacaataaagttgat
tatcacgaaacgggtaatgtgttgttggctgagtggggcaagcaaactcaagcgcagctg
catttactgcaagagttgagtgaaggtgcgctcagcaccgagaccgcgctgtatatcgag
aacgaagccccgacttggctggcagcgctgcaaaatgccatcctcaatttgcagcgttgg
ccggtgccgcccgcggcaggcaaagaagctgaaaccggagtcgaagtgcatgtgtgccat
agcctcatgcgtcagcttgaggtgctgcatgatcggctgcttgggttattcgatgcaaac
cctgcttggatgccggccgatgtattagtggttttacctaacttgacggcagccgccccg
ttgattgatgccgtgtttggcgcgaccgacagcaagcgtcatattccttataggatcacc
ggattgccgcgcttgcagtccaacccgatggcgcgcgttttatatgaaatgcttgagtta
cctgcgcgtagcattggcgtggtagctttaatcgaatggctacgcacggacgcattagct
gcgcgttatgcaattcgtgctgaggataagactcaaatggatgccgcaacctctacgcag
cgccaagagggcggaggtgatgccgtatttgaaacgatccggctctggcttgccagcgcg
ctggcgcggcgtggtcttgcgccagcgcatgaggttctgacggctcaagaaaacttgagt
gcgccggagcggcatacttttgcggacgcgctcatgcggctttatcttggctatgcattg
ccggcgggggcgttgccgctggcagagtatctacccatgctctctctaagtggtgctcaa
gctagcctgttaggttctttgtcccgctttatcgatgatttagctgagtttgcggatgca
tgcgcgcaggcgcactcggcgactgcctggcgcgcgattttgttgaatgcgcttgagcgc
ttttttgcaatcgatgctgaatcagcgcagccaatcactgaactgcgcgacataattata
gcgcttaccggcgcgattgcggccggagatgcaacccagcaagcgataccagcagccgtg
ctgcgtatggcgtttgggcgggtgctgaatgagcccgcgcggggaggggtgccaaccggt
ggtgtgacattttctgcactgaccagcttgcggggtttgccttaccgtgtggtatgcata
ttggaggctggggagggtgtattacccggtaaggtgcgtaccgatgaatttgacttgatg
gcggcctttagccaggccggagaccgccaacggcgcgatgatgagcgcgccgttttcctt
gacctggtgcttgctgcgcgcaattatctattgcttgcctatacggggcgcagtattcgt
gacaacacgcctctgccgagtgctgctgtggtcagtgaattattggattatttaagccag
gcattggctgggccgaatgctacgcaagctgaaatggtggcggcgcgcgcgcggttggtg
attgagcatccgttgcaagccttcgcggttgaatatttaaatcatgagagtcggctgttt
acgtatgatccagatcgcgctgaaattgccagcgcgctgcgttcgaatccatcttcggcc
gagggtcatgcgctaccgttttttagcgcgccgttgccactagaggacagccaggaaatt
ttcttagatgattttgagcggttttggcaacatccagggcgggcgttattgcgcgatagg
ctaggtattgcgctggcccatgctccgcgtgagcaatccgattttgcgccgtttgcactt
gaatatgctggacgggatgcgttggcaaaacgtctgttgccaggattattggcgcagggg
gatacgccacctgaaactagcccggcaaatcaaactcagagcgtaccgaagcttttattt
gaacgcgcaagtcgtattgcgcttgccagtcctgaactacctgatggcgcaacgggcgta
tttgagggaacgcgcgaattgaatgccttagcagcgcttgctgcgcgcattcgggcggcc
cgtgcggctggcgtggcaagctatccgttcgcgtttgaattagagccaaaatggcctgcg
gcgccatctgtatgcaacgagctcgcggcggttgccgctttagatgcgcgcatccagttt
acgggcgtattagagaatgtcagtcaggaaggattgcttctgtaccgctctgggcgaccc
aacgcgcgcgactatctgagcgcgtggttatgtcatttggttttatgtgagttggcgcca
gagggcgttaagccgcgtacagtatggctaggcgactccacggactttactttaaatcgg
gtccaggatgcgcgccggtatctaaatgaattaatcgcgctgtatcgcgtgggtcgctgt
gcgccactgcattttttcccaaaaagtgcttgggctttgatgagtgatggcgaggacgct
gcgcgtagaatatgggttggcaatcagggaaccgcgtcgcacagcgtggccgaaatggat
gatatatggttccagctgatgctacgtggcgaatcgctcgaagggatgttagatgcgcgt
tttaaggcgctggcgcaaaccgtgttcgcgccactgctcgagcatcttgagctggcgcgc
agccgataa
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