Mycoavidus sp. B2-EB: MPB2EB_0648
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Entry
MPB2EB_0648 CDS
T09873
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MPB2EB_0648 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myco03400
]
MPB2EB_0648 (recD)
Enzymes [BR:
myco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MPB2EB_0648 (recD)
DNA repair and recombination proteins [BR:
myco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MPB2EB_0648 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
AAA_22
Flavi_DEAD
DEAD
PhoH
RecD_N
SLFN-g3_helicase
AAA_25
nSTAND_NTPase5
T2SSE
AAA_16
YdaS_toxin
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
BBO59528
LinkDB
All DBs
Position
715392..717143
Genome browser
AA seq
583 aa
AA seq
DB search
MTSVELTSDLLGESHKAGDLVALEPALLDAAQFLADGFARRIKLLAQRLGASAQVARVTA
LAAAEISRAHSHGHVCVALNVLAERLGETPSAVQRWLRSSGLVSDGQAADIELLPLVLDN
GGRLYLARYYAYERRIAHVLAACASAGRLTVVSGGPGTGKTTAMVSQLVNLLEADPALRI
VLAAPTGKAAQRMLAALSERASHLPAALKQRLPEQSFTLHRLLGASRRLSAQPTAALPYD
VIVVDEASMIDVALAAQLVDALAPHSRLILLGDKDQLAAVEAGAVFAELSVSQALAHCVS
RLEHNYRFGLESAIGRLSLAIRAGAPTEALAALVIESPACAPLGLGFSSAAAVLIDDDSE
ALSARSLDFVAHGFGPYAKVLKDFLSELAKPQAKCDLGPLFEALNHYRVLSAVRAGPRGI
ETLNAVLAARVCALANITLVQGAVWFAGRPVMITRNDYALGLFNGDTGIALPVAGNKFRV
VFPTTDGGWRAVSPAVLPPHETAFALTVHKAQGSEFNQLAFILPAMAHSGLTRELVYTAI
TRARQTLAILGSPRVFEHAILTPTRRAAGLSARLEEAVLLQQD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagtcgagctaacctctgaccttttaggtgagtcgcataaggccggtgatctg
gtcgccttagagccggcgctgcttgatgcggcgcaatttttagcggatggttttgcgcgg
cgcatcaaactgttggcacagcggcttggggccagcgcccaggtggcacgcgtcacggcg
ttggcggcagctgaaataagccgtgctcattcgcatggacatgtttgtgtggcgctcaac
gttctagctgaacgcttaggcgaaaccccgtcggccgtgcagcggtggttgcgctcaagt
ggcctggtcagcgacggtcaagcagcagatattgaattgctgccgcttgtgctagataac
ggggggcgactttatctggcgcgttactatgcttatgagcggcgtatcgcgcacgtgctt
gcggcgtgcgccagtgcgggccggcttacggtagtgagtggcggaccaggcaccggtaag
acaacggcaatggtgagtcaactggtgaacttactcgaggccgacccggcgctccggatt
gtgctggctgcgcctacgggcaaagctgcccagcgcatgctggctgcactcagcgagcgt
gctagtcaccttcctgccgcgcttaagcagcgtttacccgagcagtctttcaccttgcat
cgattgctgggtgcgagtcggcggcttagcgcccagcctactgctgcgttgccctatgat
gtgatcgtggtggatgaagcgtcgatgattgatgttgcactggcggctcaactggtcgat
gcgcttgccccacatagtcggctgattttgttaggcgataaagatcagctagcagcggtt
gaggccggagcagtatttgctgagctcagtgtcagccaagcattggcccattgcgtgagt
cgactcgagcataattatcgttttgggcttgaatcagcgattggacggctatcgctagcg
atccgcgctggcgcgccaaccgaggcattagcagcgttagtcattgagtcgcctgcgtgt
gcacctcttggcttaggttttagcagcgccgctgccgtattaatcgacgatgatagcgag
gcgctgagtgcacgttcattagattttgtggcgcatggttttggtccttatgccaaagtg
ctcaaagatttcttatctgaactagctaagccgcaggcgaagtgtgacctaggcccgtta
tttgaggcattaaaccactaccgagtattgagcgctgtgcgtgccgggccgcgcggaatt
gaaacgctcaatgcggtgttagcggcccgtgtttgcgcgctggcaaatataaccttggtg
cagggggccgtatggtttgccggccggcctgtcatgattacacgcaacgattatgcgctg
ggcctttttaatggcgatacggggattgccttgccggtagcgggaaataaattccgggtt
gtctttccaaccacagatggaggctggcgcgcagtgtctccagcggtattgccgcctcat
gaaacggcgtttgcgttgaccgtgcataaagcgcagggctcggaatttaatcagctggct
tttatcctacctgccatggcccatagcggattaacgcgtgagctagtctacacggcgatt
acgcgtgcgcggcaaacgcttgcaatcttggggagtcccagggtctttgagcatgctatt
ttaacgccgactagacgtgcagcgggattgtctgcacgtctagaagaagccgttttgctg
caacaagattaa
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