Entry |
|
Name |
|
KO |
|
Organism |
myco Mycoavidus sp. B2-EB
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:myco00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MPB2EB_0799
03430 Mismatch repair
MPB2EB_0799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:myco03400]
MPB2EB_0799
Enzymes [BR:myco01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPB2EB_0799
DNA repair and recombination proteins [BR:myco03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MPB2EB_0799
MMR (mismatch excision repair)
Other MMR factors
MPB2EB_0799
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
896613..898937
|
AA seq |
774 aa
MADLLSSLNPEQRAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQTGRLSPAQVLAVTF
TNKAAREMITRLSALLPINPRGMWIGTFHGLCNRLLRVHCQAAGLPATFQILDIADQLSA
LKRLLKGLNLDSEKYPPKQLQSFINHAKEEGLRPSKMDVHNPFNRQFVELYEAYEIQCQR
EGAVDFAELLLRSYELLAREPSLREHYQARFQHILVDEFQDTNRLQYQWLKLLAGPAGSL
FAVGDDDQSIYGFRGANVGNMLDFQREFEVRNLIKLEQNYRSHGHILDAANGLIANNAQR
LGKNLYTEAGAGEPVRVYRAETDTREASWLVEEIHALTAPGEALDQIALLYRSNAQSRVL
EHMLVSQGIPYRVYGGLRFFERQEIKHALAYLRLLDNLDDDTSFLRVVNFPTRGIGARAL
EQLNDMARLHQCSLAAAVSYVGGKTGANLIAFVQFIEQMRRATQAMSLPEAVEYITQASG
LINHYETEREGQDRIENLRELVNAAVAFMAENGDELNTPARSIPLAPGATPAAQLPVNDP
SAQISLTAEAIDSMTPLSAFLSHASLEAGDNQAQTGQNAVQLMTVHAAKGLEFNAVFITG
LEEGLFPHQNSTNDANSLEEERRLMYVAITRAKKRLYLSFAQSRMLHGQTRYNIGSRFID
ELPAEGLKWLTSKNDSLAQNSMTRSRDENSWGRNWFAKKSTQEIRLAPSALEARQRTADT
GFWIGQAVFHTKFGEGTVAALEGSGAEARAQVNFGRHGAKWLALAVAKLQPIDD |
NT seq |
2325 nt +upstreamnt +downstreamnt
atggctgatttactgagttctttaaaccccgagcaacgagccgcagtgactttgccggat
gagccagcgttaattcttgctggcgctggcagtggcaaaacgcgggtgctgacaacccgc
attgcttggctgattcagacgggccgtttgagtccggcgcaagtgctggccgttacgttt
acgaataaggcggcgcgcgagatgattacgcgtttgagcgcactgctgcctatcaatcct
cgcggcatgtggattggcacgttccatggcttgtgtaaccgtttgctgcgcgtgcattgc
caagcggcaggtttgcctgcgacatttcagatacttgatatcgccgatcaattgtctgcg
cttaagcgtttgctcaaagggcttaatctcgatagcgagaaatacccgcccaaacagcta
caaagctttatcaatcatgcaaaagaagaaggtttgcgaccttctaaaatggatgtgcat
aatccctttaaccgtcaatttgttgagctctatgaagcttatgaaattcaatgccaacga
gaaggtgcggttgattttgcagaattactcctgcgcagttatgagttgctcgcacgtgag
ccatcgctgcgggagcactatcaagctcgttttcaacacattttagtggacgagtttcaa
gatacgaacagattgcaataccagtggctcaagcttttggcgggtcccgcagggagccta
tttgcggttggcgatgatgatcaaagtatctatggttttcggggcgctaatgttggcaat
atgctggatttccagcgtgaatttgaagtgcgtaatttgatcaagctggaacagaattac
cgctctcatggccacatcttagatgccgccaatggccttatcgcaaataacgcgcagcgc
ctgggcaaaaatctctataccgaagcgggcgcgggcgagcccgtgcgagtctatcgagca
gagactgacacgcgggaagccagttggttggtggaagagatccacgctttgaccgcacca
ggggaggcgctcgaccaaatcgctttgctttaccgcagcaatgcgcaatctcgggtgctt
gagcatatgttggtcagccaggggattccataccgcgtatacggtggattgcgctttttc
gagcggcaggaaattaaacatgcgctggcgtatttgcgcttgcttgataatctggatgac
gatacttcatttttacgggttgtcaatttcccaactcgcggcattggcgcacgcgcgctg
gagcagttaaatgatatggcgcgcctgcatcaatgctcgctggcggctgctgtttcctat
gtggggggtaaaacgggcgccaatctcatcgcatttgttcagtttattgaacaaatgcgc
cgcgctacgcaagccatgagcttgccagaggcggttgaatatattacgcaggcaagcggt
ctgattaaccattatgaaaccgagcgtgaaggacaagatcggattgaaaatttacgtgaa
ttagtcaatgcggcggttgcttttatggccgagaatggagatgaattgaacacgccagcg
cgttcgatccctctagcgcctggcgctacgccagcggctcagttgccggtaaacgatcca
tctgcacaaattagcttgacggctgaagcaatagatagcatgacgccgctttctgccttc
ctgtctcacgcttcgcttgaggcgggggataaccaagcgcagacggggcaaaatgcagtg
caactaatgactgtgcatgcggctaaagggcttgaatttaatgcggtttttattacaggc
ctcgaagaagggctgtttcctcaccaaaacagtacaaatgatgcgaatagcctggaggaa
gagcggcgtttaatgtacgttgcgatcactcgcgcgaaaaaacgcttatacttatctttc
gcgcaaagccgtatgttgcatgggcaaacgcgttataacatcggctctcggtttatcgat
gaattgccggccgaagggctgaaatggttaacctctaagaatgattcattggcccaaaat
agcatgacgcggagccgtgacgagaatagctgggggcgtaactggtttgctaaaaagtct
acgcaagagatacgccttgcgccgtccgccctcgaggcgcgtcagcgtacggcggatacg
gggttctggatcgggcaggcggtttttcatacaaagtttggtgaaggcactgtagcggcg
cttgaaggcagtggcgctgaggcacgcgcgcaggtcaattttggtcggcacggcgcgaaa
tggctggcgctagcagtggcgaaattgcaaccgattgacgattag |