Mycoavidus sp. B2-EB: MPB2EB_0898
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Entry
MPB2EB_0898 CDS
T09873
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco00300
Lysine biosynthesis
myco01100
Metabolic pathways
myco01120
Microbial metabolism in diverse environments
myco01230
Biosynthesis of amino acids
Module
myco_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MPB2EB_0898 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
myco01002
]
MPB2EB_0898 (dapE)
Enzymes [BR:
myco01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
MPB2EB_0898 (dapE)
Peptidases and inhibitors [BR:
myco01002
]
Metallo peptidases
Family M20
MPB2EB_0898 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
ATP12
POU2F1_C
Motif
Other DBs
NCBI-ProteinID:
BBO59772
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Position
complement(1010801..1011973)
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AA seq
390 aa
AA seq
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MLDLFNLNCMSTTLSLVEELIALASITPADAGCQTLIAKRLKQIGFACETIAEGETTNLW
AVRHGTAAGTGKLLAFAGHTDVVPPGPLEAWNFPPFTPTQHNGRLYGRGVADMKTSLAAC
VVAVEEFVAAHPTHTGSLAFLLTSDEEGPATDGTIKVVERLQARGEQLDYCIVGEPTSHK
QLGDTLKNGRRGSLSGKLTVHGRQGHIAYPQRNPIHLLAPALAQLVAAEWDRGNEYFPPT
SWQVSNIHAGMGATNVTPGEIVVDFNFRFSTASTADTLKQRVHAMLAAHGLNPGKEYTLD
WKLSGAPFLTQPGTLSNALMQAIKNETGVQAQLSTTGGTSDGRFIAAICDQVIEFGPTNE
SIHQVNESICLNDIEPLKNIYFRVIEQLIA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgatctattcaatctaaactgcatgtctactacgctttctcttgttgaagaatta
attgccctcgcctcaatcacgccggctgacgcaggatgtcaaaccctgattgccaaacgc
ttaaagcagataggtttcgcttgcgaaactatcgctgagggtgaaaccactaacctttgg
gcggtgcgtcacggcactgcagcgggcacgggtaaattgctggcttttgcgggccatacg
gatgtggtgccgccaggtccgcttgaggcatggaatttccccccttttacgcccactcaa
cacaacggtaggctgtacggtcgaggggtggccgatatgaaaacctcgctggcggcttgt
gtggttgcggttgaagaattcgtggcggcacaccctactcatactggctcgctggcattt
ttgttgacgagtgacgaggaaggtccggcaacagacggcaccattaaagtggtagagcgt
ttacaggcacgcggtgaacagctcgattattgtattgtgggtgaaccaaccagtcataaa
cagctgggcgatacgcttaaaaacggccggcgcggttcattatctggcaagttaacggta
catggccgccagggacatattgcttatccacagcgtaatccgattcatctattggcgcca
gcgctcgcgcagctggtagcggcagaatgggatcgtggtaatgaatactttccacccacg
agctggcaagtttcaaatattcatgccggaatgggcgcaaccaatgtaacgccaggtgag
attgtggttgatttcaacttccgtttttcaactgcaagcactgcggatacgcttaaacag
cgtgtccacgctatgctggcggcacatggacttaacccaggcaaagaatatacgcttgac
tggaaactgagcggcgcgccttttttgacgcagccaggcactttatccaatgctctgatg
caagcgattaaaaatgaaaccggcgtgcaagcccagctttccaccaccggcggtacttcg
gatggccgttttattgccgctatttgcgatcaggtgatcgaatttgggccgactaatgaa
agtattcatcaagtcaatgagtcgatctgtctgaatgatattgagcccctaaaaaatatt
tattttagggtgattgagcaacttatcgcttag
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