Entry |
|
Symbol |
gyrA
|
Name |
(GenBank) DNA gyrase subunit A
|
KO |
|
Organism |
myco Mycoavidus sp. B2-EB
|
Brite |
KEGG Orthology (KO) [BR:myco00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:myco03032]
MPB2EB_1211 (gyrA)
03400 DNA repair and recombination proteins [BR:myco03400]
MPB2EB_1211 (gyrA)
Enzymes [BR:myco01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MPB2EB_1211 (gyrA)
DNA replication proteins [BR:myco03032]
Prokaryotic type
DNA Topoisomerases
MPB2EB_1211 (gyrA)
DNA repair and recombination proteins [BR:myco03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MPB2EB_1211 (gyrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1390349..1392979)
|
AA seq |
876 aa
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPSVYDGLKPVHRRVLYSMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDAAVYGTIVRMAQDFSLRYMLIDGQGNFGSVDGDNPAAM
RYTEIRMAKIGHELLADLDKETVDFEPNYDGSENEPVVLPARMPNLLVNGSSGIAVGMAT
NIPPHNLNEVVDACHLLLDRPESSIDDLIEIIPAPDFPTAGIIYGIAGVRDGYRTGRGRV
VMRAKTHFEEIDRGQRSAIIIDELPYQVNKRMLLERIAELVHEKRLEGISDIRDESDKSG
MRAVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPKLLNLKEMLVCFLAHRRE
VITRRTVFELRRARERGHVLEGLAVALANIDEFIAIIKAAPSPPSARQELMVRAWDSPLV
RDMLLRAASDTPGGGAAYRPESLNPSFGMQSDGLYKLSDVQAQEILQMRLQRLTGLEQDK
ILAEYREMMTQISDLLDILAKPERIRTIISDELAAIKKEFGDARRSQIEFNATELNTEDL
ITPQDMVVTLSHSGYVKAQPLSEYGAQKRGGRGKQATSMKEDDWIETLFIANTHDYILCF
SNHGRVYWVKVYEVPQGSRNARGRPIVNMFPLIEGERITVVLPVREFSAERYIFMATSLG
TVKKTPLEAFSRPLKKGIIAVNLDEGDYLIGAAITDGEHDVMLFSDSGKAVRFSENDVRP
MGRGTRGVRGMRLEEGQQVIALLVADNERQSVLTATENGFGKRTPIAEYTRHGRGTKGMI
AIQTTERNGKVVAAVLVEPEHEIMLITTAGVLIRTRVSGIREMGRATQGVTLISLDKGTT
LSGLQQVAETEAEEDADTETNLEADSGLDTQLTSTE |
NT seq |
2631 nt +upstreamnt +downstreamnt
atggatcaattcgccaaagagactttacccatctcactcgaagaggaaatgcgtcgttct
tacctcgattacgcgatgagcgtgattgtaggacgcgcgctgcctagtgtgtatgatggc
cttaagccagtgcatcggcgtgtgttgtattcaatgcacgagctgaataatgactggaat
cgtgcgtataaaaaatccgccagaattgtcggggatgtcatcggtaaatatcacccgcat
ggcgacgcagcagtctacggcacgattgtgcgcatggcgcaagacttttcgttacgttac
atgctgattgacggtcaaggtaattttggttcggttgatggggataaccccgccgcgatg
cgttataccgaaattcggatggctaagatcggccatgaattgttggcagacctggataaa
gaaaccgtcgatttcgagccgaattatgatggcagcgaaaatgagccggtggtgctgccc
gcgcggatgccgaatctactggttaatggctcgtcagggattgcggttgggatggcaacg
aatatcccgcctcataatttgaatgaagtggtggatgcttgccatttgctgctggaccgt
cctgagtcttcgatcgacgacctaatcgagattatcccagcgcctgattttccaacggct
ggcattatttacggtattgctggggtacgtgatggctatcgtaccggccgcggccgtgtg
gtgatgcgagctaaaacgcattttgaggaaatcgatcgtggccaacgtagcgcgatcatc
attgacgagctaccgtatcaggtcaataaacggatgttgcttgagcgcattgctgagtta
gtgcatgaaaagcggcttgagggcatttccgatattcgggatgaatcagacaagagcggc
atgcgagctgtgattgagctcaaacggggtgaagtgccagaagtggtgctgaacaacctg
tacaaaaatacccagttgcaagacacctttggcatgaatatggtggccttggtcgatggt
cagccaaagctcctgaatctgaaagaaatgctggtgtgttttttagcgcatcggcgagag
gtgatcacccgccgtacggtatttgaattgcgccgtgcacgtgagcgtgggcatgtgttg
gaagggcttgcagttgcgttggcaaatattgatgaatttattgcgattatcaaagcggct
ccttcgccaccgagcgcgcggcaagaattaatggtgcgtgcgtgggattcgccactggtg
cgcgatatgctattgcgcgccgcgagcgatacgcctggcggtggcgccgcgtatcggcca
gaaagcttaaatccgagctttgggatgcaatctgatgggctctacaaattatccgatgtg
caggcgcaggaaattctgcaaatgcgcttgcagcgactgactgggcttgagcaagataag
attttggcagagtatcgtgagatgatgacgcaaatctctgatctgctggatattttggca
aaaccggagcggattcgcaccattattagtgatgagctagcggcaattaaaaaagaattt
ggcgatgcgcgtcgttcacagattgaattcaatgcaactgagctcaatacggaagattta
attacgccgcaagacatggttgtgacgctgtcgcatagcggctatgtgaaggcgcagcca
ttatccgaatatggtgcgcaaaaacggggtggacgaggtaagcaagcgacttcgatgaaa
gaagacgattggattgaaaccctatttattgcgaatacgcacgattatattctgtgtttt
tctaatcatggccgagtatattgggttaaggtttatgaggtgccacagggttcgcgcaac
gcgcgagggcggcctatcgttaatatgttcccattgattgaaggtgaacggattaccgtg
gtgctcccggtgagagagttctctgcggaacgttatatcttcatggctacctcgcttggc
acggttaaaaaaaccccgcttgaagcctttagtcggccgctcaaaaaaggaattatcgcg
gtcaatttggatgaaggcgattatttgattggcgcggcgattacggatggtgagcatgat
gtcatgcttttttcagatagtggcaaggcagtgcgttttagtgaaaacgatgtgcggccg
atggggcgcggtacccgtggtgtgcgcggcatgcggctagaagaggggcagcaggtcatt
gccttgctggtagctgataatgagcgtcagtctgtattaacggctactgaaaatggcttc
ggaaagcgtaccccaattgctgaatatacgcgtcatggacgtggcactaaagggatgatt
gcgattcaaacaacggagcgtaatggcaaagtggtcgccgccgtattagttgaaccagaa
catgaaattatgctgattacaacggcgggggtattgatccgtacgcgtgtttcaggcata
cgagaaatgggccgggcaacccaaggtgttacacttattagcctggacaaagggaccaca
ttatcggggctgcaacaggtcgctgaaaccgaagcagaggaagatgcggataccgagacc
aaccttgaggcagattctggccttgacacacagttaacttctacggagtaa |