Mycoavidus sp. B2-EB: MPB2EB_1279
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Entry
MPB2EB_1279 CDS
T09873
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
myco
Mycoavidus sp. B2-EB
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myco03016
]
MPB2EB_1279
Enzymes [BR:
myco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MPB2EB_1279
Transfer RNA biogenesis [BR:
myco03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MPB2EB_1279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
BBO60140
LinkDB
All DBs
Position
complement(1463749..1465704)
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AA seq
651 aa
AA seq
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MNVFFEDSGSFKAGTVLSHQNETLQVELPGGRRIKVKSKDVLLEFSAPTAAELMRAAEAC
AQAIELDFLWECAGSDEFNFAALAVEYFGAQVTSIERASLVLRLHGAPVYFRRKGRGQYL
RAPEEQLKAALAALERRSQQAALQATYEAELTAHRLPAAFEGKVLTLLTKPDKNSIEYKA
LEAAASVCGVSVAQLILDCGAIPSARALHESRFLAEHFPQGTGFGPAVEYSGPAAESGFD
ELPVTEVQAFSIDDISTTEIDDAFSVEWLANDRLRIGVHIAAPALGVARDDMIDLIARTR
LSTVYVPGDKITMLPAALINTFTLKEGGLRPVLSFYAIIDGATQDIVATETRAERVFIAH
NLRHNWLDAIVTAEAIAAGEGDYPYKKEIAVLWPFAQALYEKRQTARINYGLKRETQRYT
DFNFAIDGESVSITPRRRGSPLDLIVAELAILVNSSWGAVLAKYDVPGIYRAQRSFGVNR
TRMQIGPEPHEGLGVEQYAWSTSPLRRYIDLVNQWQLLACTQHGVAAKLVAPFKPKDADL
YVIVQNFDEIYQAYADHQNRMERFWCLRWLKQEKRERMLATVLKGDLVRFDEIPLLLHVP
GLGVHARDTKLWLDILALDELTLEVSCRLAQVLEGSEAQTDLSGDTALSCP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttttttgaagattccggcagctttaaggccggcactgtactctctcaccag
aatgaaacgttgcaagttgaattgcccggcgggcggcggattaaagtaaaaagtaaagat
gtgctacttgagttttcagcgccgacagctgctgaattaatgcgcgccgctgaggcgtgc
gctcaggccatcgaactggattttttgtgggagtgcgcagggagcgatgaatttaacttc
gcagcgctcgccgtggaatattttggcgcacaggtcacctcgattgagcgagcctcactg
gttctgcgtttacatggcgcccctgtctattttcgtcgtaaagggcgcgggcaatacctg
cgcgcaccagaagagcaactcaaagccgcattggccgctcttgaacggcgtagccaacag
gcagcattgcaggccacttatgaagctgaattaaccgctcatcgattaccggcggctttt
gagggtaaggttctcactttattaaccaaacccgataaaaattcaatcgaatacaaagcg
ttggaggctgcagccagtgtttgcggtgtttcagtcgcacaattaatactcgattgtggc
gcgattccttctgcgcgtgcattgcatgagagccgttttttggcggagcatttcccacag
gggacgggctttggcccagcagtcgaatattctgggccggcggccgagagcggcttcgac
gagttaccggtgactgaagtccaagctttttcgatcgatgacattagcacgactgaaatt
gatgacgctttctcggtcgaatggctggccaatgatcgtttgcggattggcgtgcatatt
gctgcgcccgcgcttggcgtcgcgcgggacgacatgattgacttgattgcgcgcacgcgt
ttatcgaccgtctatgttccgggcgataaaatcactatgttgcccgccgcgctgattaat
acattcactttaaaggaaggtgggctccggccggtactgtcgttttatgcaattatcgat
ggcgcaacgcaagatattgtggccaccgagacgcgcgccgagcgtgtatttattgcgcac
aatctgcgccataattggcttgatgcaatcgtaacagcagaggccattgcagcaggtgag
ggcgattatccctataaaaaagagatcgcagtactttggccatttgcgcaagcgctttac
gaaaagcggcagacggctcgcatcaattatggacttaagcgcgaaacgcagcgctataca
gactttaattttgctatcgacggcgaatcggtctcgatcaccccgcgccgacgcggttct
ccgcttgatttgattgttgctgagttagcgattttagtgaacagcagttggggtgcggta
ttggctaaatatgatgtgccaggaatttatcgggcgcaacgctcatttggcgttaaccgc
acgcgcatgcaaattggcccagagccccatgaagggctaggggttgagcaatatgcatgg
agcacctcacccttgcggcgctatatcgatttagtcaatcaatggcaacttctagcctgt
acgcaacatggtgtggcggctaaattggtggctccgtttaagcccaaagatgcagatttg
tacgtgattgtgcaaaattttgacgaaatttatcaagcctatgcagatcaccagaatcgc
atggagcgtttttggtgcttgcgctggctcaagcaagaaaagcgtgaacgtatgcttgcc
acggtcctaaaaggagatttggttaggtttgacgaaatcccgctattgctgcatgtgcct
ggtcttggtgtgcatgcgcgcgatactaagctgtggctcgatattctcgcgctagacgag
cttactcttgaagtttcatgtcgcctagcacaagtattagaggggagtgaggctcagacg
gatctatctggcgacaccgcgctgagctgcccataa
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