Mycoavidus sp. B2-EB: MPB2EB_1425
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Entry
MPB2EB_1425 CDS
T09873
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco00470
D-Amino acid metabolism
myco00550
Peptidoglycan biosynthesis
myco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MPB2EB_1425 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MPB2EB_1425 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
myco01011
]
MPB2EB_1425 (murD)
Enzymes [BR:
myco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MPB2EB_1425 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
myco01011
]
Precursor biosynthesis
Amino acid ligase
MPB2EB_1425 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
XdhC_C
AlaDh_PNT_C
NAD_binding_8
DAO
Motif
Other DBs
NCBI-ProteinID:
BBO60285
LinkDB
All DBs
Position
complement(1626111..1627649)
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AA seq
512 aa
AA seq
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MFGDFRQPAVLVLGLGASGLALARWCARYGCRVRVADTRAAPPQLAAFKEERIEAELICG
EVTPALLDGIELIALSPGISPRHTEFAALLEEAHVRGLPLWGELEFFAQALRALTTEAYR
PKLIAITGTNGKTTTTALTGLLCERAGHRVSLAGNIGPPLLERLAAALSADLLPEIWVLE
LSSFQLTSAYTFAPDAAAILNITQDHLDWHPSFEHYAAAKGRIFGAHTVRILNRDDANTM
ALAQSSGWISEETEKNLPSVTPKTAGVMTFGLDAPRRSGDYGLLHENGMTWLAVAESVVE
RSAPTSARARAGIENEIVVKRLMPVEALRIRGLHNAANALAALALCRALELPLASLMHGL
REYRGEPHRVETICALNGVEFIDDSKGTNVGATVAALNGLARRIVLIVGGDGKGQDFTPL
ATPVARWCRAVMLIGRDAPRLRQALAGTGVPLTECATLSEATHAAARMAQTGEIVLLSPA
CASFDMFRDYRHRAQVFRQAVEELASACGVAL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgattttcgacaacctgctgtattagtgctaggtctgggcgcttcgggcctg
gccttggcgcgttggtgcgcgcgctatggttgccgggtgcgggtcgctgatacgcgggcc
gcgccgcctcaactcgcggcgttcaaagaagagcggatcgaggcggagttgatctgcggc
gaggtcactccggccttactcgatggcattgaattaattgcgcttagcccaggcatttca
cccaggcatacggagtttgccgcgctccttgaagaggcgcatgtgcgtggcctaccgctg
tggggcgagctcgaattttttgcgcaagcgctgcgcgcactgacaacagaggcttatcgg
ccgaaactcatcgccattaccggcaccaatggcaaaaccacaacgacggcgcttacgggt
ttgttgtgcgaacgggccggccatcgcgtgagcctggctggcaatattggcccaccgttg
cttgagcgcttagcggctgctcttagcgcggatctattaccggaaatttgggtgctggaa
ctctccagttttcagttaaccagtgcttatacatttgcaccggatgccgcggcgatactc
aatatcacacaagatcatttggattggcatccgagctttgagcactatgccgccgctaaa
ggccgtatctttggggctcatacagtgcgtattttgaatcgtgacgatgcgaacacgatg
gcgctggcgcaaagttctggctggatcagcgaagagactgaaaaaaatctgcctagcgta
acgcctaaaaccgctggcgtgatgacttttggactcgatgcgccgcgccgcagtggtgat
tacggcctactgcacgagaatggcatgacttggctagcggtggctgagtcggtggtggag
cgtagcgcgccgacatccgcgcgcgcacgagcgggtatcgaaaatgagattgtggtcaaa
agattaatgccggttgaagcactgcgtattcgcggtttgcataatgcggcgaatgcattg
gctgcgttggcattatgtcgcgcgcttgagcttcctctcgcaagcctgatgcacggcctg
cgtgaatatcgcggcgagccgcatcgggttgagacgatttgtgctttaaacggggttgag
tttattgacgacagtaaaggaacgaatgtcggcgcaaccgtggccgcgctcaatggctta
gcgcgccggattgtattaattgtaggcggggatggcaaagggcaagattttactccgctg
gcgacgccggttgcccgttggtgccgcgccgtgatgttgatcggtcgcgatgctccgcgt
ttgcgccaggctttggctgggacgggtgtaccgctgaccgaatgcgcaacgctaagcgag
gcaacgcacgcagccgctcgtatggctcaaacgggtgaaatcgtcctattgtcgcctgct
tgcgccagttttgacatgtttcgagattaccgccatcgggcgcaggtatttcggcaggcc
gttgaagagttagccagcgcttgcggagtcgctctatga
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