Mycoavidus sp. B2-EB: MPB2EB_1556
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Entry
MPB2EB_1556 CDS
T09873
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPB2EB_1556 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myco03019
]
MPB2EB_1556 (pcnB)
Enzymes [BR:
myco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MPB2EB_1556 (pcnB)
Messenger RNA biogenesis [BR:
myco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MPB2EB_1556 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
DUF3723
WH_Halo_primase
Motif
Other DBs
NCBI-ProteinID:
BBO60415
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All DBs
Position
1754590..1756062
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AA seq
490 aa
AA seq
DB search
MIRKFIRKLLGQAELPASNRGAKQASHKKPPVSVPARIHQIDSALISRHALRVTSTLQQE
GYNAFIVGGAVRDLLLGVAPKDFDVATDATPEQVQKLFRRARLIGRRFQIVHVPFGQEII
EVSTFRASLSASAAATRAPLPAGQSARARRGELDHRLHAIDASGRVLRDNLWGQQHEDAA
RRDFTINAMYYDPATQTVLDYHHGMADIRARLLRMIGDPVTRYREDPVRMLRVVRFAAKL
GFEIEEATGKPISSLAELLGNVPSARLFDETLKLLLCGQALDCLRQLRATGLHDDLLPML
DTAFEHPQSEKFITLALSNTDERIRAGKYVSASFLFAALLWHEVREHWQKYKAANEYPIP
ALHRAMDETLYAQMKKLAIQRRHLGDMKEIWGLQPRLEKRGNSAFKLLEHPRFRAAYDFL
LLRCESGELDPALAQWWTAFIAADSAQREALLTESGPESSPRRRRRRGRAKPKESQDAGK
STLNPVEKLS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgattagaaaatttattcgcaaactattgggccaagctgaattgcccgcatccaatcgt
ggcgccaaacaagcatctcataaaaaaccaccggtgagcgtaccggcccgtatccatcaa
atcgattctgccttgatctcacggcatgcgctgcgcgtaacgagtaccttacaacaagaa
ggttacaatgcatttattgtgggcggtgcagtacgtgatttgctactaggcgtggcgcca
aaagattttgatgtggcaaccgatgccacgcctgaacaagtgcaaaagctatttcggcga
gcgcgcttaattgggcggcgctttcaaattgttcatgtcccattcgggcaagaaattatt
gaggtctcgactttccgggccagtttaagtgcatccgccgctgcaacccgtgcccctctg
cctgcaggccaaagcgcgcgtgcgcggcgcggcgagttagaccatcgtctacatgcaatc
gatgccagcggacgcgttctgcgcgacaatctttggggacaacaacacgaagatgcggca
cggcgcgatttcaccatcaatgcgatgtactatgatccagcgacgcaaacggtgctcgat
taccatcatggcatggccgatattcgcgcgcggcttttacgcatgattggagaccccgtt
acgcgctatcgtgaagatccggtgcggatgttgcgcgtggtacgttttgcggcaaaactc
ggctttgaaattgaagaagcgaccggcaagccgattagctccctcgccgaattgctcggc
aatgtgccgagcgctcggctgtttgatgaaaccctcaaactgctgctctgcggtcaagca
ctcgactgtttgcgccaattgcgcgctaccgggctgcatgatgatttattgcccatgctc
gataccgcttttgagcacccacaaagcgaaaaatttattacgcttgctctcagcaatacc
gatgagcgtattcgcgcaggtaaatatgtctccgctagttttctattcgcggccttgtta
tggcatgaagtacgcgagcactggcaaaagtataaagccgccaatgagtaccccattcct
gcgctccatcgcgcaatggatgaaacgctctatgcgcagatgaaaaaattggcgattcaa
cggcgccatctcggagacatgaaagaaatttggggcttgcaacctcgccttgaaaagcgc
ggcaacagcgcattcaagttgctggaacacccgcgttttagagccgcttatgattttttg
ctgttgcgttgtgaatcaggtgaactcgatcctgccttggcacaatggtggacggctttt
atcgcagcggattccgcccagcgcgaggccttgctcacagaaagcggaccggaatcctct
ccccgccgccgtagacgacgtggccgtgccaagcccaaagaatcccaggatgcgggcaaa
tcaacgcttaacccagtggaaaaattgagctaa
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