Mycoavidus sp. B2-EB: MPB2EB_1628
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Entry
MPB2EB_1628 CDS
T09873
Symbol
mrdA
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
myco
Mycoavidus sp. B2-EB
Pathway
myco00550
Peptidoglycan biosynthesis
myco01100
Metabolic pathways
myco01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
myco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MPB2EB_1628 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MPB2EB_1628 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
myco01011
]
MPB2EB_1628 (mrdA)
Enzymes [BR:
myco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MPB2EB_1628 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
myco01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
MPB2EB_1628 (mrdA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BBO60484
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Position
complement(1827150..1829111)
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AA seq
653 aa
AA seq
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MPDFKDTEQQLQHFRLRVAAAALFVFLCFALLAARFLYLQIWRYGQYSLQADENRISVAP
MVPRRGVIADRNGIVLAQNYSAYTLEITPAKINGTLDEVINSLSQIVVVDARDRRRFKKL
LEDSKNFESLPLRIRLSDTEVARFTAQRFRFPGVEVRIRWLRQYPLGATAAHVIGYIGRL
SQRDQERIRNASDLNDSGVRAYDPRLDMDNYKGTDHIGKIGVEQSYETELHGQTGFEEVE
VTAGGRPVRTLSRSQSIAGNNLMLSLDISLQQIAEQAFAGRRGALVAIEPATGDVLAFVS
APSFDPNAFVDGIDQQTWDELNTSTDRPLLNRPLQGAYPPGSTYKPFVALAGLALGKRTP
QWGFQDPGFYTLAGHTFRDDVPGGHGWVDMYRSIVQSCDTYYYMLARDLGVNAMADFMAP
WGFGQLTGIDIEGEMRGVLPSTHWKKKAYHRRPDLQRWYDGDTISLGIGQGYNSFTTLQL
AHATATLANDGVVMKPHLVKTIEHPRTHETRLTVPSASYQINVNQKDIDFIKRAMVGVMT
QGTAANAFRGASYQAAGKTGTAQVFSLQGAKYRAHTLAEHRRDHALFVAYAPADKPTIAL
AVVVENGGWGAQAAAPIARKVLDYYLVERFKPKANAAAMPALPGAVSEKPVIQ
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactttaaagatactgaacagcagttgcagcactttcgcctgcgtgtggcggcg
gcggcgctgtttgtatttctgtgttttgccctgttggcggcgcgttttctatatttgcag
atttggcgctacggacaatattcgctacaggcagatgaaaaccgcatctcggtcgcgcct
atggtgccaaggcgaggggttattgctgaccgcaatggtattgtattagcccaaaattat
tctgcttatacgctcgaaattaccccggcaaaaattaatggtacgctagatgaggtgata
aatagcctatcgcaaattgtggtggttgacgcgcgcgaccgacgccgctttaaaaagctg
ttagaagattcaaaaaactttgaaagtctgcctctgcgtatccgcctttcggatacggaa
gttgcgcgtttcacagcacaacgctttcggtttccaggcgttgaggtgcgtattcgctgg
ttacgccaatacccgcttggcgccactgcagcgcatgtaattggttatattggtcggctc
tcgcagcgtgaccaggagcgcattcgaaacgcgagcgacctgaatgatagcggggttaga
gcttatgacccgcggcttgatatggacaattataaaggcaccgaccatatcggcaaaatt
ggtgttgaacagagttatgagactgagttacacggccagacgggttttgaagaggtcgaa
gtgaccgcgggcggacgcccggtgcggactttgtcgcgcagccaatccatcgctggcaat
aacctgatgctctcgttagatattagtttgcagcaaattgcagagcaagcttttgccggc
cggcgcggggcgctcgtggcgattgagccagctacgggcgatgtattggcttttgtttcc
gctcctagcttcgatccaaatgcgtttgttgatgggatagatcagcaaacgtgggatgaa
ttaaatacctcaaccgatcgtccactgttaaatcgcccattgcagggggcttatccgccg
ggttcaacctataagccatttgttgccctcgctgggttagctttgggcaaacgcactccg
cagtggggttttcaggatcctggtttttatactctggcgggccataccttccgcgatgat
gtgccaggtggccatggctgggtggatatgtatcgctcgattgtgcaatcatgcgacact
tattactatatgttggcgcgtgatctgggcgtgaatgcaatggccgactttatggcgcca
tggggttttgggcagttaaccgggattgatattgaaggtgagatgagaggtgtcttgcct
tcgacccactggaaaaagaaagcgtaccaccgacgccctgacctacaacgatggtacgac
ggtgacacaatcagcttaggaattgggcaagggtataactcatttactacgttgcaactg
gctcatgcaactgcgactctagccaatgatggcgtggtgatgaagccccatttggtaaaa
accatcgaacatccgcggactcatgaaacccgtctgacagtgccaagtgcgagctaccaa
atcaatgtgaatcagaaagatattgattttattaagcgcgctatggttggcgtgatgacg
caaggaaccgcggcaaatgcttttagaggagcaagctaccaagcggctggcaagacgggt
actgcacaagtcttttcattgcaaggtgcaaaatatcgtgcgcatacgttagccgagcat
cggcgcgatcatgccttatttgtggcttacgctcctgctgacaagccaaccattgcgctt
gcggtagtcgttgaaaatggcggctggggggcgcaggctgccgcacctattgcccgtaag
gtgcttgattattatttggtagagcgtttcaaaccaaaggccaacgccgctgcaatgccg
gctctgccaggtgctgtgtctgaaaaaccggtcatccaataa
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