Mycoplasma sp. 1654_15: HF996_00230
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Entry
HF996_00230 CDS
T11400
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mycp Mycoplasma sp. 1654_15
Pathway
mycp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mycp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF996_00230 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mycp03400
]
HF996_00230 (uvrB)
DNA repair and recombination proteins [BR:
mycp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF996_00230 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HF996_00230 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
Kinesin
SWI2_SNF2
Helicase_C_2
AAA_7
DUF87
AAA_16
Cas3-like_C_2
Ribosomal_L12
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QJB70955
LinkDB
All DBs
Position
52056..54017
Genome browser
AA seq
653 aa
AA seq
DB search
MFELISKFKPTGDQPKAIEKLVQGIKNHKQHQVLLGVTGSGKTFTMANVIAQLNRPVLVL
SHNKTLALQLFTEFKEFFPHNRVEYFVSYFDFYRPEAYLPAQDVYIDKTSKTNLDLEAMR
MSTLNALTMRRDTIVVSSVASIYGAYNPKEYKQSFINIEINQKIKPSDFAIELVKRQYKR
NQVDTVSGSFMVKGDVFIITPAWTDSYLIKIDFFGDVIEKITKINPVDKKVLKTYIGYTI
FPASAYSLTSDTIEEAIKTIETELDFQLNYFEKEEKLVEKQRLKERVLNDIDSLREFGFC
NGIENYSRHIDQRQAGEKPYTLLDYLPKDAIIFIDESHMMIPQLNAMYEGDRSRKSNLVD
YGFRLPSALDNRPLKFEEFEEFQHQKIYISATPADYEIDKADGEVIQQIIRPTGLLDPVI
EVKPTINQVDFIYDLLQEQKVKNERTLILTTTKRSSEELSKYLQSKKQKVYYIHSEFTTF
EREAILIKLRKGIYDAVIGINLLREGIDLPEVSLIIVLDADKESFFRSKTSLIQIIGRAA
RNDHGKVIFFADKITKSMQAALDDNHNKRDIQQKYNKENNITPKTILKPIVESIKEKDKN
AIISLIHSKTKKDLKEKQKLIDSLRKQMKEAAKEEDYEKALQLQQVIFELEGS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaattaatatcgaaatttaaaccaacaggtgatcaacctaaagcaattgaaaaa
ttagtgcaaggcatcaaaaatcacaaacagcatcaagttcttttaggagttaccggttca
ggaaaaacttttactatggcaaatgtaattgcgcaattaaatagacctgttttagtgtta
tcacataacaaaacattagcacttcaattatttacagaatttaaagaattttttccacac
aacagagtagaatatttcgtttcttattttgatttttatagaccagaagcttatttacca
gctcaagatgtttatattgataaaaccagtaaaactaatttagatttagaagcaatgcgt
atgtctactttaaatgcacttactatgcgtagagatacaattgtagtatcttcagtagct
tcaatttatggagcttataatccaaaagaatataaacaaagctttataaatatagaaatt
aatcaaaaaattaaaccttcagattttgcaattgagttagtaaaaagacaatacaaaaga
aatcaagttgacacagtatcaggttcatttatggtcaaaggagacgtgtttataatcaca
ccagcttgaactgatagttacttaataaaaatagatttttttggcgatgtcattgaaaaa
ataactaaaattaatcctgtagataaaaaagttttaaaaacttatataggttataccatt
tttcctgcttcagcttattctctaacttcagatactattgaagaagctataaaaactatt
gaaaccgaattagattttcaactaaattactttgaaaaagaagaaaaattagtagaaaaa
caaagactcaaagaaagagttttaaatgacatcgattcactaagagaatttggtttttgt
aacggaatagaaaattattctagacatatagatcaaagacaagctggtgaaaaaccatat
actttgttagattatttaccaaaagatgcaatcatttttattgatgaatcacatatgatg
attcctcaacttaatgcaatgtacgaaggtgatagatcaagaaaatcaaatttagtagat
tatggcttcagacttccttctgctttggataacagacctttaaaatttgaagaatttgaa
gaatttcaacaccaaaaaatatatatttcagcaacaccagcagattatgaaattgacaaa
gcagatggcgaagtaattcagcaaattattagacctacaggtttactagatcctgttatt
gaagtaaaaccaacaataaatcaagttgattttatttatgatctacttcaagaacaaaaa
gttaaaaacgaaagaacactaattttaacaaccactaaaagaagttcagaagaattaagt
aaatatttacaaagtaaaaaacaaaaagtttattatattcattcagaatttacaactttt
gaaagagaagcaattctaattaagttaagaaaagggatttatgatgcggtgataggaatt
aaccttcttagagaagggattgatttgccagaagtttctttgattattgttttagatgct
gataaagagtcattttttagatcaaaaacttccttgattcaaataataggtagagctgct
agaaatgatcatggtaaagtaattttctttgctgacaaaataaccaaaagtatgcaagct
gctcttgatgataatcacaacaaaagagacattcaacaaaaatacaataaagaaaacaat
attacaccaaaaactattttaaaacctattgttgaaagcataaaagaaaaagataaaaac
gctattatttctttaattcatagtaagaccaaaaaagatttaaaagaaaaacaaaaatta
attgattctttaagaaaacaaatgaaagaagctgcaaaagaagaagattatgaaaaagct
ttacaattacaacaagtaatttttgaactagaaggtagttaa
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