Mycoplasma sp. 1654_15: HF996_01245
Help
Entry
HF996_01245 CDS
T11400
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mycp Mycoplasma sp. 1654_15
Pathway
mycp03030
DNA replication
mycp03430
Mismatch repair
mycp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mycp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF996_01245 (dnaE)
03430 Mismatch repair
HF996_01245 (dnaE)
03440 Homologous recombination
HF996_01245 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mycp03032
]
HF996_01245 (dnaE)
03400 DNA repair and recombination proteins [BR:
mycp03400
]
HF996_01245 (dnaE)
Enzymes [BR:
mycp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF996_01245 (dnaE)
DNA replication proteins [BR:
mycp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF996_01245 (dnaE)
DNA repair and recombination proteins [BR:
mycp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF996_01245 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF6058
Motif
Other DBs
NCBI-ProteinID:
QJB71120
LinkDB
All DBs
Position
275985..278924
Genome browser
AA seq
979 aa
AA seq
DB search
MQKLINLHTNTEYSFLQSTIKVNSLIEFAKKNQLKHLVITDKDNMFGVAKFYNECKANNI
NPIIGLDLEVQNFRFILIAKNYEGFLHLSFLSSKKMSFEEIKITDLDNENIIVIDHPKLG
LYSKSKQRLNFKNYFVHANDPKIANAVYVQTRNVLFANEEKYLKILHKISDSSQPLTNVD
FIDFEDWKEEVHPEIIKRTNELVEDIKIDFPKATMILPDFKNQENLNPAEFLQQLLEKQV
AKKKAEFKKYPSFKERLVYEFNVIKNLKFSNYFLIIWDFLRWARKNNILIGPGRGSSSGS
LISYLLNITQVNPLKFDLIFERFLNPKRISMPDIDIDVQDNQRDKLIKYIQEKYGYENTA
LIITFSTFGAKMAFSDVAKKLKNIAASEVLAITKHIPAGHTLEEAYKVNANFRSFVEKQD
KNGEFLYKEIFEIAKFLEGMPRQSGTHAAGIVIADKPIYNYVPTLISKEKYNQTQFSAEF
LEQFSLLKIDLLGLKNLTVVQGILNSVNQEHNFLLNFNTIPIFDEETNRLLTKGKTVGIF
QLESPGMANTLRKVGVNGIEDVVAVISLFRPGPIKNIPLYAQRKKNEANYEGISQEYNDI
LSSTYGIIIYQEQIMQICQTIAGFDFATSDLIRRAISKKEAEKLHEAKQLFIQGGIKKGY
SEHILEKIFEQIEYFAEYGFNKSHAVAYATLAYKMAYLKTHFPLQFYSYLITNEDGAQAN
IAKFIKEAQSQMKFKKPNINISSTSAVYELQSKTIYLPLILIKGLGAVACQKILDEREKN
GTYKDFLDFVIRMKIINISNTIITLLINSGALSDFGNIPTLLANLSTAESYKICILEDEN
KNLYCDYSLIPGKFELEKKEDDIKLTMENEAKFLGMQFSLPESNKDLQNEVLLSEIYPNV
EYKMILYVKKVANLTSKTGVSMKKITITDFQSPDKDVWLFGSKITFFEAVREKEYYEFKI
IKLKDKLVLQNHLKEIRYD
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattaatcaatctacatacaaacactgaatatagctttttacaatcgacaatt
aaagttaattctttaatagaatttgccaaaaaaaatcaactcaaacacttggttataacc
gataaagacaatatgtttggggttgctaagttctataatgagtgtaaagctaacaacata
aatcctattattggacttgatttagaagttcaaaattttcgttttattttaattgctaaa
aattatgaaggttttcttcatttgtcttttttaagttctaaaaaaatgtcttttgaagaa
attaaaattactgatttagacaatgaaaacataattgttatcgatcatccaaagctgggt
ttatatagcaaaagcaagcaaagactaaattttaaaaattattttgttcatgcaaatgat
ccgaaaattgctaatgcagtttatgttcagacaagaaatgttttgtttgcaaatgaagaa
aaatacttaaaaatccttcataaaatatcagatagttcacagccactaactaatgtagat
tttattgattttgaagactgaaaagaagaagttcaccccgaaataattaaaagaaccaat
gaattagtagaagatattaaaatagattttcctaaagctacaatgatacttcctgatttt
aaaaatcaagaaaacttaaatccagctgagtttttgcaacaacttttagaaaaacaagta
gccaagaaaaaggcagaatttaaaaaatatcctagctttaaagaaagattagtttatgaa
tttaatgttattaaaaacttaaagttttcaaactactttttaattatctgagattttcta
agatgagctagaaaaaataatattttaataggtccaggaagaggttcttcttcaggttct
ttaatttcatacttacttaacataactcaagtcaatccactcaaatttgacttgattttt
gaacgttttttaaatcctaaaagaatttcaatgcccgatattgatatcgatgtacaagat
aaccaaagagataaattaattaagtatattcaagaaaaatatggctatgaaaacacagct
ttaataataactttttctacttttggggctaaaatggcattttctgatgttgcaaaaaaa
ctcaaaaatatagcagcttctgaagttttagcaataacaaaacatatacccgctggacat
acattagaagaagcatacaaagtaaatgcgaattttagatcttttgttgaaaaacaagac
aaaaatggagaatttttatataaagaaatttttgaaattgctaagtttttagaaggaatg
ccacgccaatctggaacacatgcagccggaattgtaattgcagataaaccaatttataat
tatgtaccaactttaatatccaaagaaaaatataatcaaacacaatttagtgcagaattc
ttagaacaattttcattattaaaaatcgatttattaggattgaaaaatttaactgtggtt
caaggaattctaaattcagtaaatcaagaacataattttctacttaatttcaacacgatt
cctatttttgatgaagaaactaacagattattaactaaaggaaaaactgttggtattttc
cagttagaatctcctggtatggctaacactttaagaaaagtaggagttaatggaattgaa
gatgttgtagcagttatttcgctatttagaccgggaccaataaaaaacattcctttatat
gcgcaaagaaagaaaaatgaagcaaattatgaaggaatttcacaagaatataatgatatt
ttaagttcaacttacggtattattatttatcaggaacaaattatgcagatttgtcaaact
attgcaggatttgattttgcaacatcagatttaatacgtagagccatttcaaaaaaagaa
gcagaaaaactacatgaagctaaacaactttttatacaaggtggaattaaaaagggttat
tcagaacatattttagaaaaaatatttgaacaaatcgagtattttgctgaatatgggttt
aacaaatctcacgctgtagcttatgcaactcttgcttataaaatggcatatttaaaaact
cattttcctttgcagttttattcctatttaataactaacgaagatggtgctcaagccaat
attgctaaatttataaaagaagctcaatcccaaatgaagtttaaaaaaccaaatattaat
atttcatcaacttcagctgtttatgaattacaaagcaaaacaatttatctgcctttgatt
ttgattaaaggactaggtgcggttgcttgtcaaaagattttagacgaaagagaaaaaaac
ggaacttacaaagactttctagattttgtaattaggatgaaaatcatcaacatttctaat
acaattatcacacttttaataaattcaggtgcacttagcgattttggaaacatacctact
ttattagctaatttatcaactgcagaatcttataaaatttgtattttagaagatgaaaat
aaaaatttatactgtgattattcattgattccaggcaagtttgagcttgaaaaaaaagaa
gatgatataaaattaactatggaaaatgaagcaaaatttttaggaatgcaatttagtttg
ccagagtctaataaagatttacaaaatgaagttttactttcagaaatatatccaaatgtt
gaatataaaatgattttatatgttaaaaaagtagcaaatttaacttcaaaaactggtgtg
tcaatgaaaaaaatcacaataactgattttcaatcacctgataaagatgtttgacttttt
ggaagcaaaataaccttttttgaagcagttagagaaaaagagtattatgaatttaaaata
attaaattaaaagataaattagtattacaaaatcatttaaaggaaataagatatgactaa
DBGET
integrated database retrieval system
