Mycoplasma sp. 1654_15: HF996_03625
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Entry
HF996_03625 CDS
T11400
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mycp Mycoplasma sp. 1654_15
Pathway
mycp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mycp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HF996_03625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mycp03021
]
HF996_03625
03400 DNA repair and recombination proteins [BR:
mycp03400
]
HF996_03625
Enzymes [BR:
mycp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HF996_03625
Transcription machinery [BR:
mycp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HF996_03625
DNA repair and recombination proteins [BR:
mycp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HF996_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QJB71521
LinkDB
All DBs
Position
complement(840664..844926)
Genome browser
AA seq
1420 aa
AA seq
DB search
MSTTNKQDTKVSRQYAKIYENTIEKISLALATPENILEWSRGEVTKPETINYKTFKPERG
GLFDELIFGPLIDYKCPVCGKKYKKSNENTICVATKECEELKSKILPKIARRYSMGHIAL
NSPVLHFWFFKIDHSIISKLLGLKNEENGKPVSKSSLESLIYYKSHIVLETGGLKSLSKN
KIIDISEAGVIYKNALQEILQKFSEESEEYQDISTALTDLTEVATSKIGRDYGIDFYELN
EIIEEYSDARISTGTKAIEYLLDHLDLQAEKVKVEQEIQEVQNTTSLSKKDSTKNQKRDK
LYKRLQVINAFLNSGQDPKSMIIKNLPVIPADLRPLVQLDGARHSTSDVNELYRRIIIRN
NRLKRWYETDAPILIIQNELRMIQEAIDALIDNQRKSPNPVTTKDNRPLKSISDALTGKK
GRFRQNLLGKRVDYSGRSVIVVGPKLKMHQAGLPRRMAAKLFEPWIIRRLIEQNSAPSIK
TARKMIEEQNPQIWPHVAEVIKNKPILLNRAPTLHRLSIRAFDPVLVRGKAIQLHPLVTT
GFNADFDGDQMAVHVPISPEAIRETRELMFANKNILGPKDGEPIVNPSQDMILGLYYLSQ
EKDDAKGQGRYFGSYNEMMKAYEVKVVDLHARVALPFYEVKTAKSASLHENKYIISTVGK
FILNRIFPDNFPFIFDNKVDNLELNYDTQLEKYLIPMGTNIPEYIQNLPLNPALTKKDIA
KIVRQIFDTYDYVVSKEDVASVINKLDFENYQDSILLYRKLLDFKGEPLALTHCIKLADF
TTAEFERLTRINKIHSANKIKVFEVKDKVEILEKVWFNYTNVVASILDDIKDLGFIYSTN
SGVSMAISDIKIAPKKQEYLKEGEDYINQLNRFYSQGWITDDECYILSINKWTAVKNEIQ
KNLNETVELDPKNSLVIMMKSGARSNMSNFVQLAGMRGLMANNVKALKVDAENERVVRSI
VEVPVKSSFLEGLTSFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVTQNDC
FSDFGFVVKQIIDTKTNTTIVPLAERIEGRFLNKDVVSPDGMTLAKSGDFVNDQLARRIV
DSGVKAVEIRSILSCHTKNGVCKKCYGKDLATNRLVAIGEAVGIIAAQSIGEPGTQLTMR
TFHTGGVAGVEDITGGFTRLIELIDAHEHPWGRPAQISPVHGVVTKIESVKNKEDGQLTG
SILITIEYKNEENLDANKIIRVASNQKLRVQIGDKVIPGQKLVEGPIILKELLNYADART
LQNYLLKEIQRIYRMQGITISDKYIEIIIRQMLSKIQIIDNGDSDFFVGSIVDIFDYQEV
SGKLIAEGKKPPFGSIIIKGAKQIPLLSNSFLAAASYQETSKILVHSVISSQVDKLEGLK
ENIIVGHKIPAGTNSNFEHKSKYDIRDPYSFFKPQINKNH
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaactaataaacaagatacaaaagtttctcgtcaatatgcaaaaatttacgaa
aacacaattgaaaaaatttctttagctctagctactcctgaaaatattttagaatgatca
agaggagaagtaactaagccagaaaccatcaattataaaaccttcaaaccagaacgtgga
ggtctttttgatgaattaatttttggtccattaattgactacaaatgtcctgtttgtggt
aaaaaatataaaaaatcaaacgaaaacacaatttgtgtagctactaaagaatgtgaagaa
ttaaaatcaaaaattcttccaaaaatagctcgtcgttattcaatgggtcacatcgctctt
aattctccagttttacacttttgattcttcaaaatagatcactcaattatttcaaaatta
ttaggacttaaaaacgaagaaaacggaaaacctgtttcaaaatcttctttagagtcttta
atttactacaaatcccacatagttttagaaacaggtggtttaaaatctttatctaaaaac
aaaattattgacatctcagaagctggtgttatttataaaaatgcactacaagaaattctt
caaaaattttcagaagaatcagaagaatatcaagacatttcaaccgctcttactgactta
acagaagttgcaacttctaaaatcgggcgtgattacggaattgatttttatgaattaaat
gaaattattgaagagtattcagatgctcgtatttctacaggaactaaagcaatcgaatat
cttttagatcatcttgatttacaagctgagaaagtaaaagttgaacaagaaattcaagaa
gttcaaaatactaccagtctttctaaaaaagattcaactaaaaatcaaaaaagagacaaa
ctctataaaagattacaagttattaacgcatttttaaactcaggtcaagatccaaaatct
atgattatcaagaatcttcctgttattccagctgatttacgtcctttagttcaactagat
ggtgctcgtcattcaacttcagatgttaacgaattatatcgtcgtattattatcagaaat
aatcgtttaaaaagatgatatgaaacagatgctccaattttaattattcaaaatgaactt
agaatgattcaagaagcaattgatgctttaattgataatcaaagaaaatcaccaaatcct
gttactacaaaagacaacagaccgcttaaatccatttcagatgcgttaacaggtaaaaaa
ggtcgttttagacaaaatttacttggaaaacgtgttgactattcaggtagatctgttatt
gttgtaggtccaaaacttaaaatgcaccaagcaggattacctcgtagaatggctgcaaaa
ctctttgagccttgaattattagaaggctaattgaacaaaacagcgctccttcaataaaa
acagctagaaagatgattgaagaacaaaatccacaaatttgacctcacgttgccgaagtt
ataaaaaacaaaccaattttattaaacagggcaccaacccttcaccgtctttcaattagg
gcttttgatcctgttttagttcgtggaaaagcaattcaattacaccctcttgtaacaaca
ggatttaacgctgacttcgatggtgaccaaatggctgttcacgtgccaatttcaccagaa
gctattagagaaacaagagaattaatgtttgctaacaaaaacattttaggtccaaaagat
ggagaaccaattgttaacccatcacaagatatgattttaggtctttactatctttcacaa
gaaaaagatgatgctaaaggtcaaggtcgttattttggttcttataatgaaatgatgaag
gcatatgaagtaaaagtagttgatttacatgctagagttgccttacctttttatgaagta
aaaacagcaaaatctgcttcattacatgaaaataaatacataatttcaacagtaggaaaa
ttcattctaaacagaattttcccagataatttcccttttatttttgacaataaagtagat
aacttagagctaaattatgatactcaactagaaaaatatttaattccaatgggaacaaat
attcctgagtatattcaaaatttacctttaaatcctgcgcttactaaaaaagatatagca
aaaattgttcgtcaaattttcgacacttatgactatgtggtttcaaaagaagatgtagca
agcgtaatcaacaaattagactttgaaaactatcaagattctatacttttatatagaaaa
ttacttgattttaaaggtgaaccacttgctttaactcactgcattaaattagctgatttt
acaacagcagaatttgaacgtttaactagaattaataaaattcattctgctaataaaatc
aaggtttttgaagtaaaagataaagtagaaatccttgaaaaagtttgatttaattacaca
aacgtagtagcttctatcttagatgacattaaagatcttggatttatttactcaacaaac
tctggtgtttccatggctatctcagacatcaaaattgcaccaaaaaaacaagagtattta
aaagaaggcgaagactacataaatcaactaaatcgcttctattcacaaggttgaatcact
gatgatgaatgttatattctttctatcaataaatgaacagctgttaaaaatgaaattcaa
aagaatctaaacgaaactgttgaactcgatccaaaaaactcactagttattatgatgaaa
tcaggagctagatcaaatatgtctaacttcgttcaactagctggtatgcgtggattgatg
gcaaacaacgttaaagctttaaaagtcgacgctgaaaatgaaagagttgttcgttcaatt
gttgaagttccagttaagtcttcattcttggaaggtcttacttcatttgagttctattct
tcaacccacggggctcgtaaaggtctaaccgatactgcgcttaacactgcgaaatccggt
tatttaacacgtcgtttagttgacgtagctcaaaacattgttgtgactcaaaatgattgt
ttttctgactttggatttgtagtaaaacaaattattgacactaaaacaaatacaacaatt
gttcctttagcagaaagaattgaaggtagattcttaaataaagatgtagtaagtccagat
ggtatgacacttgctaaatcaggagattttgtaaacgatcagttagctagaagaatagta
gattctggtgtaaaagcagttgaaattcgttctattttatcttgccacactaaaaatggt
gtatgtaaaaaatgttatggtaaagacttagcaactaacagattagtagctatcggagaa
gcagttggaattattgcagctcaatcaattggtgaacctggaacacagcttacaatgcgt
actttccatacaggaggggttgctggtgttgaagatattacaggaggatttactcgttta
attgagctaatcgatgctcacgaacatccttgaggacgtccagcacaaatttcaccagtt
cacggagtagttactaaaatagaatcagttaaaaataaagaagatggacaacttacaggt
tcaattttaattacaattgagtacaaaaatgaagaaaatttagatgcaaacaaaataatt
agagttgcttcaaatcaaaaattaagagtacaaattggtgataaagtaatacctggtcaa
aaactagttgaaggtccaattattctaaaagaattactaaattacgctgatgcaagaaca
ttacaaaattacttattaaaagaaattcaaagaatttaccgtatgcaagggattacaatt
tctgataaatacatcgaaattattattagacaaatgctttcaaaaattcaaattattgac
aacggagattcagatttctttgttggttcaatagtagatatttttgattatcaagaagta
agtggaaaactaattgctgaaggtaaaaaacctccttttggaagcattattatcaaagga
gcaaaacaaattcctttactttcaaactccttcctagctgctgcatcatatcaagaaact
tcaaaaatcttggttcactcagtaatttcttcacaggttgataaattagaaggtcttaaa
gaaaacattattgttggacataaaattccagcaggaacaaactctaattttgaacacaaa
tcaaaatatgatattagagatccttattcattctttaagccacaaatcaataaaaatcat
taa
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