Myotis davidii (David's myotis): 102752659
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Entry
102752659 CDS
T02992
Symbol
SKIV2L2
Name
(RefSeq) Ski2 like RNA helicase 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
myd
Myotis davidii (David's myotis)
Pathway
myd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102752659 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myd03019
]
102752659 (SKIV2L2)
03041 Spliceosome [BR:
myd03041
]
102752659 (SKIV2L2)
03009 Ribosome biogenesis [BR:
myd03009
]
102752659 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
myd03016
]
102752659 (SKIV2L2)
Enzymes [BR:
myd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102752659 (SKIV2L2)
Messenger RNA biogenesis [BR:
myd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102752659 (SKIV2L2)
Spliceosome [BR:
myd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102752659 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
102752659 (SKIV2L2)
Ribosome biogenesis [BR:
myd03009
]
Eukaryotic type
Pre-60S particles
Helicases
102752659 (SKIV2L2)
Transfer RNA biogenesis [BR:
myd03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102752659 (SKIV2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
102752659
NCBI-ProteinID:
XP_006761842
UniProt:
L5LZA3
LinkDB
All DBs
Position
Un
AA seq
1040 aa
AA seq
DB search
MADAFGDELFSVFEDDSAAAPGSRKDKEKGKWKGPPGPAEKAGKRSDGNLQSESTSVGKA
KRNVDFEGTDEPIFGKKPRVEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADEDY
IPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREK
QRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEV
MREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQ
PCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLREAGDLAKGDQK
GRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEE
VFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFAT
ETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEK
MSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVV
EKVRNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKV
KNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSRESLKNSATEAAKPAKPEE
KGEMQVVPVLVHLLSAISSVRLYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDD
MGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKA
RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA
EQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSF
KPHLMDVVHTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENK
FAEGITKIKRDIVFAASLYL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccttcggggatgagctcttcagcgtgttcgaggacgactccgccgctgcg
cctggaagcaggaaggacaaggagaaggggaaatggaaggggcctccggggccggcggag
aaggccgggaaacgttctgatgggaatttacaatccgagtcaaccagtgttggaaaagcc
aagagaaatgtggattttgaaggcacagatgaacccatttttggaaagaagcccagggta
gaagagtcaataactgaagacttaagcttggctgacttgatgcccagggtgaaggtgcag
tcagttgaaactgttgaagggtgtacacatgaggttgcacttcctgcagatgaagattat
ataccacttaaaccacgagttggaaaagctgcaaaggaatacccgttcattcttgacgct
tttcagagagaagccatccagtgcgttgacaataatcagtctgttttagtgtctgcacat
acgtcagccggaaaaactgtttgcgccgagtatgccatcgcattggccttaagggaaaaa
cagcgtgtgatatttaccagcccgattaaggctctgagtaaccagaagtaccgtgaaatg
tatgaagaatttcaagatgtgggtctgatgacgggagatgttactattaatcctacagca
tcttgtcttgttatgaccacagagattttgagaagtatgctgtacagaggttctgaagtt
atgcgcgaggttgcttgggttatattcgatgaaattcattacatgagagattcagagcgt
ggtgtggtgtgggaagaaactatcattttgcttcctgataatgtccactacgtctttctc
tcggctactattccaaatgcccgacagtttgctgaatggatttgccacttacataagcag
ccttgccatgtaatttacacagattaccggcctactccactgcagcactacatcttcccg
gcggggggagatggcctgcaccttgtggttgatgaaaatggtgacttccgagaagataac
ttcaacaccgcaatgcaagttctccgcgaggcaggggatctggcaaaaggagatcagaag
ggtcgaaaaggagggacaaaaggaccatcaaatgtgttcaagattgtgaagatgattatg
gaaagaaattttcaacctgtaattattttcagtttcagtaagaaagattgtgaagcctat
gcacttcaaatgaccaaattagatttcaacacagatgaagaaaagaagatggtggaagaa
gtattcagtaatgcgattgactgcttgtcggatgaagataaaaagctccctcaggttgaa
catgtgcttcctcttttgaagcgggggattggcatccaccacggtggtttacttcctatt
ttgaaagaaacgatagaaatcctcttttctgaaggattgataaaggcgttatttgcgacg
gagacttttgccatgggaattaacatgccggctaggacagttttatttacaaatgcccga
aaatttgatgggaaagactttcgatggatttcttctggtgaatacattcagatgtctggt
cgtgccggaaggaggggcatggatgacagaggaatcgtgattcttatggttgacgaaaag
atgagcccaactattgggaagcaactgcttaagggctcagccgaccccctgaatagcgct
ttccatttaacctacaacatggttctgaacctgctgcgtgtggaagaaatcaaccccgag
tacatgctggagaagtccttctaccagtttcagcattacagagccattcccggggtggtg
gagaaggtgcggaactcagaagaacaatataataaaatagtgatacccaatgaagaaagc
gtggtcatctattacaagatcaggcagcagcttgccaagctgggtaaagaaattgaagaa
tatattcacaaaccaaaatattgcttaccatttctacaaccaggtcgtttggtaaaggta
aagaatgaaggagacgattttggctggggagtagtcgtgaatttctccaaaaagtcaaat
gttaagcccaactccggggagctcgacccgctgtatgtggtggaagtgcttctgcgctgc
agccgagaaagcttgaaaaactccgctacggaggctgcaaagccggccaagcccgaggag
aagggggagatgcaggttgttccagtcttggtgcatctcctgtctgctatcagcagtgtt
aggctctacattcccaaagaccttcgacccctggacaacagacagagtgttctaaagtcg
atacaggaagttcaaaaacggtttcccgatggtgttcccttattggacccgatcgatgac
atgggcattcaagaccagggcctgaagaaggtcatccagaaagtggaggcgttcgagcac
cgcatgtactctcacccccttcacaacgacccaaacctggaaaccgtgtatacgctctgt
gaaaagaaagcacagatcgcaatagatattaaatctgcaaagcgagaactcaagaaagca
agaacagtcctgcagatggatgaactcaagtgtcgcaaacgcgtgctacggcgcctgggg
tttgccacttcctccgatgtcatagagatgaagggacgagtggcctgtgagatcagcagt
gccgacgagctcctgctcaccgagatgatgttcaacggcctgttcaacgacctgtccgcg
gagcaggccaccgccctgctgagctgcttcgtgttccaagagaactccagtgagatgccc
aagctcaccgagcagttggcggggccccttcgccagatgcaggaatgtgctaaacgaatt
gcaaaagtttcagcagaagccaaactggaaattgatgaggaaacatacctgagctcattc
aaacctcacttaatggatgtagtgcacacctgggccacgggggcgacatttgcccacatc
tgcaaaatgacagatgtctttgaaggcagcatcatccgctgcatgcggcgcctggaagag
ctgctgaggcagatgtgtcaggcggcgaaagccattgggaacacggagctggagaacaag
ttcgcggaaggcatcaccaaaatcaagagagacatcgtgtttgccgccagcctctacctg
tag
DBGET
integrated database retrieval system
